Gene omics information

Query gene ID At1g49010
Gene name myb family transcription factor
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At1g49010841324myb family transcription factorF:transcription factor activity, DNA binding;P:in 6 processes;C:unknown;PMOFBVS.X.H.G.
0.3032.1At1g29530839830unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBAS.X.H.G.
0.1710.2At1g06240837134unknown proteinF:unknown;P:biological_process unknown;C:unknown;BOPFMS.X.H.G.
0.1710.2At1g78180844154bindingF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOS.X.H.G.
0.168.8At1g71810843511ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAVS.X.H.G.
0.114.1At4g19985827743GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:N-terminal protein myristoylation, metabolic process;C:unknown;BPOAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.199.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
22.899.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
17.999.5GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
12.899.3GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
12.699.3GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
12.499.3GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
12.399.3GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.899.3GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
11.399.3E-ATMX-33-raw-cel-1562596264
11.399.3GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.113e-1479At5g05790830464myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOC.G.S.X.
0.171e-1377At5g08520830751myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFBC.G.S.X.
0.118e-961At5g58900836007myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOFC.G.S.X.
0.148e-961At5g56840835786DNA-binding family proteinF:transcription factor activity, DNA binding, nucleic acid binding;P:regulation of transcription;C:unknown;POC.G.S.X.
0.083e-859At2g38090818387myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOFC.G.S.X.
0.075e-756At5g61620836284myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POMC.G.S.X.
0.065e-756At3g16350820882myb family transcription factorF:transcription factor activity, DNA binding;P:in 7 processes;C:unknown;PMOBFVC.G.S.X.
0.065e-756At1g74840843823myb family transcription factorF:transcription factor activity, DNA binding;P:in 9 processes;C:chloroplast;POMC.G.S.X.
0.042e-654At5g23650832430myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.243e-1893Glycine maxGmaAffx.50298.1.S1_atBI424203--8e-35At5g08520myb family transcription factorC.G.S.X.
0.122e-550Hordeum vulgareContig14119_atContig14119--3e-5At1g49010myb family transcription factorC.G.S.X.
0.051e-346Oryza sativaOs04g0676700AK106166.1-MCB1 protein3e-6At5g04760myb family transcription factorC.G.S.X.
0.233e-37157Populus trichocarpaPtpAffx.210452.1.S1_atpmrna20524--1e-37At1g49010myb family transcription factorC.G.S.X.
0.131e-1067Triticum aestivumTa.6290.1.S1_atBJ301403--1e-10At1g49010myb family transcription factorC.G.S.X.
0.132e-25115Vitis vinifera1615729_atCB003157--8e-25At1g49010myb family transcription factorC.G.S.X.
0.052e-756Zea maysZm.9645.1.S1_atAY207047.1ZmMybst1-1e-8At3g16350myb family transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
XGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
XGO:0009739A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
XGO:0009751A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
XGO:0009753A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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