Gene omics information

Query gene ID At1g48800
Gene name terpene synthase/cyclase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g48800841302terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POS.X.H.G.
0.6982.9At1g29480839825unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPS.X.H.G.
0.5873.8At1g68420843171asparaginyl-tRNA synthetase-relatedF:nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAPS.X.H.G.
0.5469.5At3g61720825345C2 domain-containing proteinF:unknown;P:tryptophan biosynthetic process;C:unknown;PMOFS.X.H.G.
0.5469.5At3g30730822811unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5267.4At3g04390819594xanthine dehydrogenase family proteinF:electron carrier activity, oxidoreductase activity, catalytic activity;P:biological_process unknown;C:endomembrane system;MOBFPS.X.H.G.
0.5065.3At2g138903768362transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5065.3At4g15710827248unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4963.5At5g28950833021unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.4862.5At2g28755817425UDP-D-glucuronate carboxy-lyase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
774.6100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
556.8100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
290.9100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
236.4100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
207.4100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
184.4100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
173.5100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
159.399.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
149.899.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
148.399.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.741e-157557At1g48820841304terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.291e-30135At3g29110822559terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POC.G.S.X.
0.201e-21105At3g29190822572lyase/ magnesium ion bindingF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBC.G.S.X.
0.257e-2099At4g20200827766terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POFC.G.S.X.
0.075e-1893At4g15870827268ATTS1encodes a putative terpene synthaseC.G.S.X.
0.183e-1687At1g66020842915terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBC.G.S.X.
0.344e-1583At4g20230827770terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFOC.G.S.X.
0.103e-1067At4g20210827768terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;POC.G.S.X.
0.031e-965At3g14490820672terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxPsAffx.psZG009xA07f_atPsAffx.psZG009xA07f--8e-1At2g17950WUS (WUSCHEL)C.G.S.X.
0.024e-136Hordeum vulgareContig16738_atContig16738--2e-3At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.012e+036Oryza sativaOs04g0497600AK059415.1-Lupus La protein family protein1e-2At4g32720AtLa1 (Arabidopsis thaliana La protein 1)C.G.S.X.
0.031e+036Populus trichocarpaPtpAffx.225139.1.S1_s_atpmrna44271hypothetical protein-3e-1At1g2229014-3-3 protein GF14, putative (GRF10)C.G.S.X.
0.029e-136Triticum aestivumTaAffx.97935.1.S1_atBQ801609--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.021e+034Vitis vinifera1615530_s_atCF201449.1hypothetical protein LOC100256412-6e-9At2g39960microsomal signal peptidase 25 kDa subunit, putative (SPC25)C.G.S.X.
0.016e+032Zea maysZm.8456.1.A1_atBM335025hypothetical protein LOC100273451-5e+0At5g14020-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00265Link to KaPPA-View 4Sesquiterpenoid biosynthesis
00393Link to KaPPA-View 4Monoterpenoid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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