Gene omics information

Query gene ID At1g47540
Gene name trypsin inhibitor, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g47540841163trypsin inhibitor, putativeF:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;POS.X.H.G.
0.9095.1At1g03890839379cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMOS.X.H.G.
0.8994.6At4g271508288232S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.8994.6At5g07190830610ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.S.X.H.G.
0.8894.0At4g271408288222S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMOS.X.H.G.
0.8894.0At1g03880839383CRU2 (CRUCIFERIN 2)Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
0.8894.0At4g25140828617OLEO1 (OLEOSIN 1)Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.S.X.H.G.
0.8793.5At4g26740828781ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27.S.X.H.G.
0.8793.5At1g54860841925unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.8793.5At4g27160828824AT2S3F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
428.1100.0GSM133817Yang_1-2_old-pod_Rep1_ATH1GSE5736To identify changes in gene expression during silique senescence in Arabidopsis thaliana
371.9100.0GSM133758Lindsey_1-11_heart-stage-root_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
345.3100.0GSM133760Lindsey_1-12_heart-stage-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
228.2100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
206.5100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
189.9100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
168.1100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
167.6100.0GSM133767Lindsey_1-19_torpedo-basal_Rep4_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
161.599.9GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
158.399.9GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.571e-32139At2g43520818953ATTI2Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.C.G.S.X.
0.357e-1993At2g43535818955trypsin inhibitor, putativeEncodes a defensin-like (DEFL) family protein.C.G.S.X.
0.412e-1065At2g43530818954trypsin inhibitor, putativeEncodes a defensin-like (DEFL) family protein.C.G.S.X.
0.441e-756At2g43510818952ATTI1Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.C.G.S.X.
0.031e-136At2g35150818081EXL1 (EXORDIUM LIKE 1)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBC.G.S.X.
0.036e-134At4g15650827242protein kinase-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Glycine maxPsAffx.psHA010iH03r_s_atPsAffx.psHA010iH03r--8e-1At3g54170ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)C.G.S.X.
0.041e+032Hordeum vulgareContig6271_atContig6271--4e-4At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinC.G.S.X.
0.034e+032Oryza sativaOs01g0892300NM_190232.1-Leucine-rich repeat, plant specific containingprotein4e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
0.063e+032Populus trichocarpaPtpAffx.211117.1.S1_atpmrna21838hypothetical protein-1e+0At1g47540trypsin inhibitor, putativeC.G.S.X.
0.049e+030Triticum aestivumTaAffx.51243.1.S1_x_atCA728839--4e+0At4g09030AGP10 (ARABINOGALACTAN PROTEIN 10)C.G.S.X.
0.043e+030Vitis vinifera1616864_x_atCF203744.1--1e+1At5g63400ADK1 (ADENYLATE KINASE 1)C.G.S.X.
0.044e+030Zea maysZm.15194.1.A1_atBM334114--4e+0At1g16025unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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