CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g47380

Gene name protein phosphatase 2C-related / PP2C-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.53 68.6 At1g47380 841141 protein phosphatase 2C-related / PP2C-related F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFBV S.X. H.G.
0.89 94.6 At1g53320 841766 AtTLP7 (TUBBY LIKE PROTEIN 7) Member of TLP family S.X. H.G.
0.75 86.9 At1g15920 838162 CCR4-NOT transcription complex protein, putative F:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOF S.X. H.G.
0.75 86.9 At1g36050 840509 unknown protein F:molecular_function unknown;P:fatty acid biosynthetic process;C:plasma membrane;MOFP S.X. H.G.
0.67 81.6 At2g46490 819258 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM S.X. H.G.
0.67 81.6 At3g22290 821798 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
119.8 99.9 E-ATMX-35-raw-cel-1574334816
73.7 99.9 E-ATMX-35-raw-cel-1574334832
63.6 99.8 E-ATMX-35-raw-cel-1574334800
60.2 99.8 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
54.9 99.8 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
54.7 99.8 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
49.9 99.8 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
40.8 99.8 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
35.7 99.7 GSM154506 Arabidopsis hydrated pollen grains rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
33.7 99.7 GSM239252 Columbia glabrous (C24) wild type stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.10 5e-14 79 At1g68410 843170 protein phosphatase 2C-related / PP2C-related F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:cellular_component unknown;PMOFBV C.G. S.X.
0.07 1e-5 52 At1g09160 837436 protein phosphatase 2C-related / PP2C-related F:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:plasma membrane;PMOFBVA C.G. S.X.
0.01 3e+0 34 At3g26130 822213 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BFPO C.G. S.X.
0.02 3e+0 34 At2g34600 818025 JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7) F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P C.G. S.X.
0.01 3e+0 34 At1g01880 837373 DNA repair protein, putative F:DNA binding, catalytic activity, nuclease activity;P:DNA repair;C:cellular_component unknown;FMOAPVB C.G. S.X.
0.01 3e+0 34 At1g77620 844097 nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, nucleotide binding;P:DNA repair, cell cycle;C:nucleus;MFOAPV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 3e-31 137 Glycine max Gma.14414.1.S1_at BQ473444 - - 1e-31 At1g47380 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.08 2e-14 79 Hordeum vulgare Contig14758_at Contig14758 - - 2e-13 At1g68410 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.13 3e-20 101 Oryza sativa Os02g0567200 AK069840.1 - Protein phosphatase 2C-like domain containingprotein 2e-20 At1g47380 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.46 5e-61 236 Populus trichocarpa PtpAffx.202064.1.S1_at pmrna4118 hypothetical protein - 6e-61 At1g47380 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.08 1e-14 81 Triticum aestivum Ta.11603.2.S1_a_at CA641341 - - 5e-18 At1g68410 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1610236_at CF405009 hypothetical protein LOC100249319 - 1e-10 At1g09160 protein phosphatase 2C-related / PP2C-related C.G. S.X.
0.14 8e-14 77 Zea mays Zm.3135.1.S1_at CD981826 catalytic/ protein phosphatase type 2C - 2e-13 At1g47380 protein phosphatase 2C-related / PP2C-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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