CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g44970

Gene name peroxidase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.65 79.6 At1g44970 841062 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM S.X. H.G.
0.85 92.4 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM S.X. H.G.
0.85 92.4 At3g23770 821959 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO S.X. H.G.
0.83 91.4 At1g75030 843841 ATLP-3 encodes a PR5-like protein S.X. H.G.
0.82 90.9 At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. S.X. H.G.
0.82 90.9 At4g20420 827790 tapetum-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.82 90.9 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF S.X. H.G.
0.81 90.4 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF S.X. H.G.
0.81 90.4 At1g69500 843283 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV S.X. H.G.
0.81 90.4 At3g13220 820512 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
144.3 99.9 GSM67086 Arabidopsis_Stigma02 GSE3056 Arabidopsis Pollination Study
143.1 99.9 GSM184900 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
134.1 99.9 GSM67087 Arabidopsis_Stigma03 GSE3056 Arabidopsis Pollination Study
111.1 99.9 E-MEXP-1246-raw-cel-1504120231
110.4 99.9 GSM133993 Birnbaum_1-26_J0571-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
104.3 99.9 GSM131576 ATGE_31_A2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
93.8 99.9 GSM131578 ATGE_31_C2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
86.8 99.9 GSM131577 ATGE_31_B2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
76.8 99.9 E-MEXP-1592-raw-cel-1617526848
70.4 99.9 E-MEXP-1592-raw-cel-1617526920
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 6e-7 56 At4g36430 829795 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to other organism;C:cell wall;PFOBM C.G. S.X.
0.04 9e-6 52 At3g49120 824073 PRXCB (PEROXIDASE CB) Class III peroxidase Perx34. Expressed in roots, leaves and stems. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response. C.G. S.X.
0.04 9e-6 52 At3g32980 823067 peroxidase 32 (PER32) (P32) (PRXR3) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane;PFO C.G. S.X.
0.03 3e-5 50 At4g31760 829304 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.04 1e-4 48 At2g38380 818419 peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase E F:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:plant-type cell wall;PFO C.G. S.X.
0.04 1e-4 48 At2g38390 818420 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFO C.G. S.X.
0.03 5e-4 46 At1g14540 838016 anionic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.04 2e-3 44 At4g08770 826447 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POF C.G. S.X.
0.04 2e-3 44 At4g08780 826448 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 8e-4 46 Glycine max Gma.5971.1.S1_at BQ610718 - - 4e-5 At2g18150 peroxidase, putative C.G. S.X.
0.05 4e-9 61 Hordeum vulgare Contig2119_at Contig2119 - - 9e-9 At1g44970 peroxidase, putative C.G. S.X.
0.04 7e-5 50 Oryza sativa Os03g0235000 D14482.1 - Peroxidase (EC 1.11.1.7) 7e-4 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.27 3e-15 83 Populus trichocarpa PtpAffx.201637.1.S1_at pmrna3241 hypothetical protein - 2e-15 At1g44970 peroxidase, putative C.G. S.X.
0.04 9e-6 52 Triticum aestivum TaAffx.131651.2.S1_s_at BQ805651 - - 2e-5 At1g14540 anionic peroxidase, putative C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1620142_at CB836189 - - 3e-1 At3g28310 - C.G. S.X.
0.07 2e-5 50 Zea mays Zm.2505.1.S1_at BG841722 hypothetical protein LOC100216859 - 4e-5 At1g44970 peroxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00413 Peroxidase, class III

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00360 Phenylalanine metabolism
00680 Methane metabolism
00940 Phenylpropanoid biosynthesis
01061 Biosynthesis of phenylpropanoids
01100 Metabolic pathways
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