Gene omics information

Query gene ID At1g44920
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g44920841058unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPAOS.X.H.G.
0.6781.6At3g56010824767unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane;PS.X.H.G.
0.6478.9At1g20810838672immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid lumen, chloroplast thylakoid lumen, chloroplast;BOPMFS.X.H.G.
0.6075.7At2g3541081810733 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:thylakoid, chloroplast stroma, chloroplast;MPFOBAS.X.H.G.
0.5673.0At5g52970835375thylakoid lumen 15.0 kDa proteinF:molecular_function unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast;OBPS.X.H.G.
0.5570.6At3g25805822172unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BPOS.X.H.G.
0.5570.6At3g56650824832thylakoid lumenal 20 kDa proteinF:unknown;P:unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast;PBOS.X.H.G.
0.5368.6At3g55250824691unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, nucleus;PS.X.H.G.
0.5065.3At2g34860818051EDA3 (embryo sac development arrest 3)F:unfolded protein binding, heat shock protein binding;P:megagametogenesis;C:chloroplast thylakoid membrane, chloroplast;BOPAMFS.X.H.G.
0.5065.3At5g55710835665-F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.3GSM270866Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1
11.799.3GSM270865Arabidopsis cell culture, 4 h_control_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
10.499.2GSM270853Arabidopsis cell culture, 4 h_control_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
10.199.2GSM270814Arabidopsis cell culture, 4 h_control_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1
7.598.8GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
7.098.7GSM131158AtGen_C-8_2-C-24_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-138At5g01870831705lipid transfer protein, putativePredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.C.G.S.X.
0.011e-138At4g28470828964RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B)encoding the RPN subunits of the 26S proteasomeC.G.S.X.
0.024e-136At5g20050832127protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.024e-136At5g54800835570GPT1glucose6-Phosphate/phosphate transporter 1C.G.S.X.
0.014e-136At2g02160814747zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.024e-136At1g33100840206MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BPOFMAC.G.S.X.
0.014e-136At1g48050841223KU80Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.C.G.S.X.
0.014e-136At1g56500842103haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, oxidoreductase activity, catalytic activity;P:metabolic process, cell redox homeostasis;C:chloroplast, chloroplast stroma;BOMPAFVC.G.S.X.
0.022e+034At4g16790827385hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:unknown;MPFOBVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Glycine maxGmaAffx.72634.1.S1_atBI471387--8e-8At4g05090inositol monophosphatase family proteinC.G.S.X.
0.023e+032Hordeum vulgareContig20996_atContig20996--8e-3At5g11910esterase/lipase/thioesterase family proteinC.G.S.X.
0.035e-240Oryza sativaOs07g0109500NM_186164.1-Ribosomal protein L13 family protein1e-16At3g0711060S ribosomal protein L13A (RPL13aA)C.G.S.X.
0.224e-859Populus trichocarpaPtp.3236.1.S1_atCN521264hypothetical protein-4e-8At1g44920unknown proteinC.G.S.X.
0.034e-136Triticum aestivumTa.26626.1.A1_atCD491403--2e-10At5g6230040S ribosomal protein S20 (RPS20C)C.G.S.X.
0.163e-548Vitis vinifera1619495_atCA818305--1e-4At1g44920unknown proteinC.G.S.X.
0.034e-238Zea maysZm.9189.1.A1_atBM267192--9e-2At1g44920unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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