Gene omics information

Query gene ID At1g44800
Gene name nodulin MtN21 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1710.2At1g44800841044nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:membrane;BOPAMS.X.H.G.
0.4355.3At4g31910829321transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:nucleus;PFBOS.X.H.G.
0.3338.1At1g31050839991transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.2522.6At4g24180828519-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVS.X.H.G.
0.1710.2At1g32450840139NRT1.5 (NITRATE TRANSPORTER 1.5)Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
111.999.9GSM184503Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
91.499.9GSM184509Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
86.499.9GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
67.099.8GSM184505Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
66.899.8GSM184495Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
63.999.8GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
61.799.8GSM184506Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
59.499.8GSM184538Whole roots 2hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
58.599.8GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
51.999.8GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.562e-50200At4g08300826384nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMFC.G.S.X.
0.149e-652At1g21890838791nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMC.G.S.X.
0.014e-240At3g01370821288ATCFM2 (CRM FAMILY MEMBER 2)Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing.C.G.S.X.
0.021e-138At2g37460818323nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMFC.G.S.X.
0.016e-136At1g02910839350LPA1 (LOW PSII ACCUMULATION1)Mutants defective in this gene were shown to have a reduced PSII content (overall reduction in the levels of several PSII subunits) and a disrupted grana stack structure. The N-terminal half of the protein contains two tetratricopeptide repeat (TPR) motifs that are arranged tandemly, each consisting of a 34-residue degenerate consensus sequence. The N-terminal sequence is rich in positive and hydroxylated amino acid residues.C.G.S.X.
0.022e+034At5g61030836224GR-RBP3 (glycine-rich RNA-binding protein 3)encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.C.G.S.X.
0.022e+034At5g01090831840legume lectin family proteinF:carbohydrate binding, sugar binding;P:biological_process unknown;C:endomembrane system;PBC.G.S.X.
0.052e+034At4g08290826383nodulin MtN21 family proteinF:unknown;P:unknown;C:endomembrane system, membrane;BPOAMFC.G.S.X.
0.022e+034At4g39810830140exonuclease/ nucleic acid bindingF:exonuclease activity, nucleic acid binding;P:biological_process unknown;C:intracellular;BOPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-242Glycine maxGma.6717.1.S1_atBU763455--9e-3At1g44800nodulin MtN21 family proteinC.G.S.X.
0.024e+032Hordeum vulgarerbaal27b24_atrbaal27b24--4e-15At2g37620ACT1 (ACTIN 1)C.G.S.X.
0.031e+036Oryza sativaOsAffx.3479.1.S1_x_at---0C.G.S.X.
0.079e-1065Populus trichocarpaPtp.3670.1.S1_atCV273865hypothetical protein-5e-11At4g08300nodulin MtN21 family proteinC.G.S.X.
0.022e+034Triticum aestivumTaAffx.121233.1.S1_atCA682415--4e+0At4g03945enzyme inhibitor/ pectinesteraseC.G.S.X.
0.021e+130Vitis vinifera1621802_atCA813116hypothetical protein LOC100257071-5e-12At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)C.G.S.X.
0.029e-134Zea maysZm.18668.1.A1_atCO519508hypothetical protein LOC100272378-4e-4At1g79250AGC1.7 (AGC KINASE 1.7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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