Gene omics information

Query gene ID At1g35890
Gene name DNA binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7888.6At1g35890840491DNA bindingF:DNA binding;P:regulation of transcription;C:cellular_component unknown;POS.X.H.G.
0.4761.2At5g568303771525transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.4659.8At4g21240827873F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4558.3At1g33870840284avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putativeF:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBS.X.H.G.
0.4558.3At1g26350839177unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At1g33930840290avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:response to bacterium;C:unknown;MPOBFS.X.H.G.
0.4457.2At2g14830815971unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVS.X.H.G.
0.4152.4At5g60130836135transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;BOMFPVAS.X.H.G.
0.4050.8At3g25850822179DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.3948.4At5g37910833770seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
482.3100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
331.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
306.3100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
299.2100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
292.8100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
237.1100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
221.6100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
213.0100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
208.9100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
187.4100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-240At5g39970833994catalyticF:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAFC.G.S.X.
0.026e-238At5g49720835035ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.C.G.S.X.
0.036e-238At4g17920827517zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVC.G.S.X.
0.026e-238At1g51340841557MATE efflux family proteinF:drug transporter activity, antiporter activity;P:multidrug transport;C:endomembrane system, membrane;BOAPFMC.G.S.X.
0.026e-238At1g77860844122KOM (KOMPEITO)mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane ProteinC.G.S.X.
0.013e-136At5g61190836240zinc finger protein-relatedF:zinc ion binding, nucleic acid binding;P:unknown;C:chloroplast;MOPFBAVC.G.S.X.
0.013e-136At1g26190839160phosphoribulokinase/uridine kinase family proteinF:adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding;P:biosynthetic process, cAMP biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAVC.G.S.X.
0.031e+034At5g11120830980unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-344Glycine maxPsAffx.psZO006iF03r_s_atPsAffx.psZO006iF03r--1e+0At5g46780VQ motif-containing proteinC.G.S.X.
0.045e-134Hordeum vulgareContig4808_s_atContig4808--2e-1At1g54410dehydrin family proteinC.G.S.X.
0.031e-138Oryza sativaOsAffx.30838.1.A1_at---0C.G.S.X.
0.033e-136Populus trichocarpaPtpAffx.210292.1.S1_atpmrna20248SET domain protein-3e-14At5g24330ATXR6C.G.S.X.
0.041e+034Triticum aestivumTa.500.1.A1_atCA699065--2e-4At2g20613unknown proteinC.G.S.X.
0.033e-134Vitis vinifera1606962_atCF405430hypothetical protein LOC100244131-4e-13At5g14240-C.G.S.X.
0.032e+032Zea maysZm.1889.1.A1_atCO520833cytokinin-N-glucosyltransferase 1-1e-3At3g55700UDP-glucoronosyl/UDP-glucosyl transferase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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