Gene omics information

Query gene ID At1g35660
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g35660840468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFBS.X.H.G.
0.3439.8At5g47400834787unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;MPOS.X.H.G.
0.3133.8At4g01280827903myb family transcription factorF:transcription factor activity, DNA binding;P:in 9 processes;C:unknown;POMS.X.H.G.
0.2930.3At5g20610832183unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMPBFAVS.X.H.G.
0.2830.3At2g44950819104HUB1 (HISTONE MONO-UBIQUITINATION 1)The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.S.X.H.G.
0.2726.2At5g19420832062Ran GTPase binding / chromatin binding / zinc ion bindingF:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:unknown;MOPBFAVS.X.H.G.
0.2624.4At3g17740821042unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.2624.4At2g41020818702WW domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFPS.X.H.G.
0.2624.4At4g01020826439helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-relatedF:in 6 functions;P:unknown;C:intracellular, chloroplast;MBOFPVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
115.399.9GSM131454AtGen_6-9322_Heatstress-Roots-3.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
83.799.9GSM131453AtGen_6-9321_Heatstress-Roots-3.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
75.999.9GSM270868Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
71.499.9GSM270870Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
61.499.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
54.899.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
47.899.8GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
47.699.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.017e-344At3g17100820967transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PMC.G.S.X.
0.011e-140At2g33580817923protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:plasma membrane;MPOBFVAC.G.S.X.
0.014e-138At5g40910834092disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.014e-138At4g13990827035exostosin family proteinF:catalytic activity;P:biological_process unknown;C:cell wall, membrane;POMC.G.S.X.
0.004e-138At3g19050821439POK2 (PHRAGMOPLAST ORIENTING KINESIN 2)PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.C.G.S.X.
0.002e+036At5g15680831422bindingF:binding;P:biological_process unknown;C:plasma membrane, membrane;MFPOC.G.S.X.
0.012e+036At5g53440835425unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol;MOFBPVAC.G.S.X.
0.012e+036At4g39750830131F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-138Glycine maxGma.2215.1.S1_atBU546695--2e+0At5g63595FLS4 (FLAVONOL SYNTHASE 4)C.G.S.X.
0.018e-136Hordeum vulgareHV_CEa0014D10r2_s_atHV_CEa0014D10r2--7e+0At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeC.G.S.X.
0.053e-25119Oryza sativaOs01g0873800AK068140.1-TPR-like domain containing protein2e-25At1g35660unknown proteinC.G.S.X.
0.138e-1997Populus trichocarpaPtpAffx.212378.1.S1_atpmrna24256hypothetical protein-6e-19At1g35660unknown proteinC.G.S.X.
0.011e-140Triticum aestivumTaAffx.106139.1.S1_atCA716434--2e+0At1g21970LEC1 (LEAFY COTYLEDON 1)C.G.S.X.
0.021e-138Vitis vinifera1612814_atCD721331--9e-2At1g35660unknown proteinC.G.S.X.
0.013e+034Zea maysZm.6150.1.A1_atCF635417nucleic acid binding protein-2e-1At1g49600ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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