CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g35614

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.67 81.6 At1g35614 840459 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.78 88.6 At2g04870 815034 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM S.X. H.G.
0.78 88.6 At3g43150 823381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.78 88.6 At5g35290 833483 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
0.73 85.5 At5g27190 3770742 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.67 81.6 At3g50320 824194 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.64 78.9 At5g36840 833651 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.63 78.1 At4g08890 3769919 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.59 74.7 At1g44990 841064 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
457.7 100.0 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
428.7 100.0 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
426.6 100.0 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
406.2 100.0 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
378.1 100.0 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
344.7 100.0 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
277.8 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
272.7 100.0 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
264.4 100.0 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
255.2 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.23 9e-28 123 At1g35500 840443 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.14 2e-22 105 At5g41660 834168 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P C.G. S.X.
0.10 1e-11 69 At3g44430 823568 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P C.G. S.X.
0.09 7e-7 54 At1g37000 840610 beta-galactosidase F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P C.G. S.X.
0.04 4e-2 38 At5g27340 832792 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown C.G. S.X.
0.02 6e-1 34 At4g19240 827664 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 6e-1 34 At1g73860 843722 ATP binding / microtubule motor F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOBFPAV C.G. S.X.
0.02 3e+0 32 At5g04620 830339 ATBIOF (BIOTIN F) The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms. C.G. S.X.
0.03 3e+0 32 At5g19910 832113 SOH1 family protein F:RNA polymerase II transcription mediator activity;P:regulation of transcription;C:mediator complex;MFOP C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Glycine max GmaAffx.80023.1.S1_at BF070125 - - 2e-1 At2g02440 unknown protein C.G. S.X.
0.05 1e+0 32 Hordeum vulgare S0000800119H06F1_x_at S0000800119H06F1 - - 2e+0 At1g35614 unknown protein C.G. S.X.
0.06 1e+0 34 Oryza sativa Os02g0834350 9630.m05870 - - 4e-1 At1g35614 unknown protein C.G. S.X.
0.03 4e+0 32 Populus trichocarpa PtpAffx.132045.1.A1_at DN492653 - - 1e+0 At1g63940 monodehydroascorbate reductase, putative C.G. S.X.
0.05 2e-1 36 Triticum aestivum TaAffx.81486.1.S1_at CA685486 - - 2e-1 At1g35614 unknown protein C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1609985_at CF403736 hypothetical protein LOC100255189 - 2e-121 At1g60810 ACLA-2 C.G. S.X.
0.04 1e+0 32 Zea mays ZmAffx.1030.1.A1_at AI881662 - - 8e-1 At2g03830 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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