Gene omics information

Query gene ID At1g35350
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At1g35350840424-F:unknown;P:unknown;C:integral to membrane;FMPOBS.X.H.G.
0.8592.4At1g55450841992embryo-abundant protein-relatedF:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOAS.X.H.G.
0.5673.0At4g34150829563C2 domain-containing proteinF:unknown;P:response to cold;C:unknown;MPFOBVAS.X.H.G.
0.5368.6At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.5267.4At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.4963.5At2g41100818709TCH3 (TOUCH 3)encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers.S.X.H.G.
0.4862.5At4g39640830118GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1)The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.S.X.H.G.
0.4558.3At4g38550830012-F:unknown;P:unknown;C:chloroplast;MFPOBVAS.X.H.G.
0.4253.9At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.4152.4At5g23490832415unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
64.899.8E-MEXP-98-raw-cel-320188804
60.499.8E-MEXP-98-raw-cel-320188859
45.399.8E-MEXP-98-raw-cel-320189024
43.799.8E-MEXP-98-raw-cel-320189079
39.799.8GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
37.999.8GSM131119AtGen_B-5_1-5-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
37.099.7GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
35.399.7E-MEXP-807-raw-cel-1173273170
35.099.7E-MEXP-807-raw-cel-1173272948
34.299.7E-MEXP-739-raw-cel-1099467419
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8902478At1g26730839214EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOBC.G.S.X.
0.402e-30135At4g25350828638SHB1 (SHORT HYPOCOTYL UNDER BLUE1)SHB1 encodes a nuclear and cytosolic protein that has motifs homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation phenotypes. Acts upstream of HFR1. Regulates seed development.C.G.S.X.
0.106e-21103At2g03260814855EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane;FMPOC.G.S.X.
0.126e-21103At1g14040837965-F:unknown;P:unknown;C:integral to membrane;FMPOC.G.S.X.
0.151e-1895At2g03240814853-F:unknown;P:unknown;C:integral to membrane;MFPOC.G.S.X.
0.106e-1893At2g03250814854EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane;MFPOBC.G.S.X.
0.081e-656At3g29060822550-F:unknown;P:unknown;C:integral to membrane;MFPOVBAC.G.S.X.
0.041e-346At1g69480843280EXS family protein / ERD1/XPR1/SYG1 family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOBC.G.S.X.
0.017e-240At1g05570837059CALS1 (CALLOSE SYNTHASE 1)Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-450Glycine maxGmaAffx.77909.1.S1_atBG882051--9e-11At1g26730EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
0.011e-138Hordeum vulgareContig18597_atContig18597--2e+0At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinC.G.S.X.
0.024e-242Oryza sativaOs02g0809800AK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinC.G.S.X.
0.187e-963Populus trichocarpaPtpAffx.209149.1.S1_x_atpmrna18114pho1-like protein-3e-16At2g03240-C.G.S.X.
0.015e+034Triticum aestivumTaAffx.16042.1.S1_atBQ482892--1e+1At5g35375unknown proteinC.G.S.X.
0.013e-136Vitis vinifera1620460_atBQ792558hypothetical protein LOC100263447-3e-7At3g54670TTN8 (TITAN8)C.G.S.X.
0.018e+032Zea maysZm.6410.1.A1_atAI691946--2e+0At3g15630unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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