CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g33870

Gene name avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.61 76.7 At1g33870 840284 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB S.X. H.G.
0.66 80.1 At5g04650 830342 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.57 73.8 At2g39520 818537 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.54 69.5 At2g35080 818074 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding F:aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:translation, tRNA aminoacylation for protein translation;C:cytoplasm;P S.X. H.G.
0.51 66.3 At1g57570 842133 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.51 66.3 At5g17720 831639 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:endomembrane system;BOMPFVA S.X. H.G.
0.51 66.3 At5g35870 833573 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.50 65.3 At1g50190 3767425 - F:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown S.X. H.G.
0.49 63.5 At1g65130 842820 ubiquitin carboxyl-terminal hydrolase-related F:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;POMFB S.X. H.G.
0.49 63.5 At1g51520 841577 nucleic acid binding / nucleotide binding F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
280.7 100.0 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
269.9 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
244.2 100.0 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
242.4 100.0 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
235.2 100.0 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
234.7 100.0 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
228.5 100.0 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
226.6 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
219.5 100.0 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
212.4 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.25 2e-21 103 At1g33830 840278 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB C.G. S.X.
0.15 3e-11 69 At2g26820 817223 ATPP2-A3 (Phloem protein 2-A3) F:carbohydrate binding;P:response to bacterium;C:unknown;MOBPFVA C.G. S.X.
0.13 1e-10 67 At1g33910 840288 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:unknown;MPOBAFV C.G. S.X.
0.05 7e-9 61 At1g33960 840293 AIG1 (AVRRPT2-INDUCED GENE 1) Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 C.G. S.X.
0.10 1e-7 57 At1g33930 840290 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:unknown;MPOBF C.G. S.X.
0.08 4e-7 56 At1g33890 840286 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBF C.G. S.X.
0.04 3e-5 50 At1g33880 840285 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:N-terminal protein myristoylation, response to bacterium;C:cellular_component unknown;MPO C.G. S.X.
0.05 1e-4 48 At1g33950 840292 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:unknown;MOPBFV C.G. S.X.
0.01 4e-4 46 At2g16640 816165 TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132) F:transmembrane receptor activity;P:protein targeting to chloroplast;C:chloroplast outer membrane, membrane;OMFBPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e+0 32 Glycine max HgAffx.6604.1.S1_at CB825607 - - 4e+0 At5g63760 IBR domain-containing protein C.G. S.X.
0.04 1e+1 30 Hordeum vulgare HVSMEh0081G23r2_at HVSMEh0081G23r2 - - 1e+1 Atmg00820 - C.G. S.X.
0.03 3e+0 34 Oryza sativa OsAffx.18881.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.219731.1.S1_at pmrna35750 hypothetical protein - 1e+0 At1g33870 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.16602.2.S1_at CA697920 - - 1e+0 At1g65620 AS2 (ASYMMETRIC LEAVES 2) C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1611336_at CD799633 - - 2e+0 At5g56230 PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2) C.G. S.X.
0.04 1e+1 30 Zea mays ZmAffx.1481.1.S1_at 40794996-108 - - 2e-1 At3g62050 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0009617 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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