Gene omics information

Query gene ID At1g33820
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At1g33820840277unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPS.X.H.G.
0.8793.5At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8491.9At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.8391.4At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.S.X.H.G.
0.7888.6At3g57900824959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At2g01500814678PFS2 (PRETTY FEW SEEDS 2)PFS2 encodes a homeodomain gene that is a member of the WUS clade of transcription factors. It delays differentiation and maturation of primordia and regulates ovule patterning. The pfs2 mutant exhibits developmental defects in the maternal integuments and gametophyte, specifically, the boundary between the chalaza and the nucellus shifted towards the distal end of pfs2 ovule primordia. In addition, leaves displayed curling and petals were wavy and crenulated. Overexpression of PFS2 affects floral organ and leaf development. Single- and double-mutant analyses reveal that PFS2 activity represses AGAMOUS expression in young floral primordia. Also involved in regulation of response to low temperature.S.X.H.G.
0.7788.0At5g14560831307unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7687.4At5g66370836769unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFS.X.H.G.
0.7687.4At3g28280822454-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7586.9At4g16050827290unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
468.9100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
446.5100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
434.2100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
390.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
389.2100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
338.3100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
305.4100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
259.1100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
253.3100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
240.5100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.033e-136At3g13480820550unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POC.G.S.X.
0.021e+034At5g08780830778histone H1/H5 family proteinF:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;POMBFAC.G.S.X.
0.031e+034At4g04990825841unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBVC.G.S.X.
0.011e+034At1g28440839742HSL1 (HAESA-Like 1)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.011e+034At1g63210842626RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulatorF:transcription elongation regulator activity, protein binding, hydrolase activity, acting on ester bonds, RNA binding;P:regulation of transcription from RNA polymerase II promoter, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:unknown;BMOFPAC.G.S.X.
0.011e+034At1g77760844112NIA1 (NITRATE REDUCTASE 1)Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.C.G.S.X.
0.024e+032At5g20030832125agenet domain-containing proteinF:RNA binding;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.024e+032At5g53340835415galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;PMOC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136Glycine maxHgAffx.22127.1.S1_atBI396953--2e-1At1g33820unknown proteinC.G.S.X.
0.042e+032Hordeum vulgareContig10962_atContig10962--1e+0At4g27657unknown proteinC.G.S.X.
0.032e+034Oryza sativaOs10g0335000NM_195802.1-Conserved hypothetical protein1e+0At1g33820unknown proteinC.G.S.X.
0.042e+034Populus trichocarpaPtp.4472.1.S1_s_atDN494369--3e-6At4g33740unknown proteinC.G.S.X.
0.034e+032Triticum aestivumTa.1341.1.S1_atBE425554--4e+0At1g33820unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1611177_atCF518669hypothetical protein LOC100263874-2e-8At1g60200splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.037e+030Zea maysZm.5788.1.A1_atAI600957hypothetical protein LOC100280278-5e+0At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage