Gene omics information

Query gene ID At1g33670
Gene name leucine-rich repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8592.4At1g33670840258leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAS.X.H.G.
0.8491.9At1g18050838385SWAP (Suppressor-of-White-APricot)/surp domain-containing proteinF:RNA binding;P:RNA processing;C:cellular_component unknown;MPOFS.X.H.G.
0.8491.9At3g28280822454-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8391.4At2g13640815849Golgi GDP mannose transporter (GONST1)F:unknown;P:transcription;C:nucleus;OMBPFVAS.X.H.G.
0.8290.9At5g26620832728unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8190.4At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At1g29730839851ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.8089.8At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.S.X.H.G.
0.7888.6At2g33160817877glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity, nucleic acid binding;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.7888.6At2g13900815874DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
482.3100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
461.1100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
402.4100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
296.9100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
288.1100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.2100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
240.9100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
233.5100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
228.6100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
218.9100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.382e-47190At1g33610840255protein bindingF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVC.G.S.X.
0.428e-47188At1g33600840254leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:cell wall, membrane, plant-type cell wall;PMBOFAVC.G.S.X.
0.482e-29131At1g33590840253disease resistance protein-related / LRR protein-relatedF:protein binding;P:signal transduction, defense response;C:cell wall, chloroplast, plant-type cell wall;PMBOFAVC.G.S.X.
0.404e-24113At2g26380817178disease resistance protein-related / LRR protein-relatedF:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.027e-446At5g23400832405disease resistance family protein / LRR family proteinF:protein binding;P:signal transduction, defense response;C:cell wall;PMOBFAVC.G.S.X.
0.022e-138At5g21960832256AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.022e-138At2g39780818563RNS2 (RIBONUCLEASE 2)S-like ribonucleaseC.G.S.X.
0.012e-138At1g72300843562leucine-rich repeat transmembrane protein kinase, putativeEncodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-138Glycine maxGma.2089.2.S1_atAW186093--2e-18At5g06120Ran-binding protein, putativeC.G.S.X.
0.021e+034Hordeum vulgareHVSMEh0101K17f_atHVSMEh0101K17f--7e-1At1g34140PAB1 (POLY(A) BINDING PROTEIN 1)C.G.S.X.
0.025e+034Oryza sativaOsAffx.22784.1.S1_at---0C.G.S.X.
0.034e-654Populus trichocarpaPtpAffx.409.1.S1_atBP930762--4e-6At1g33590disease resistance protein-related / LRR protein-relatedC.G.S.X.
0.031e-242Triticum aestivumTaAffx.38175.1.A1_atBJ252678--3e+0At4g32080unknown proteinC.G.S.X.
0.028e-134Vitis vinifera1621350_atCD009838--5e+0At5g52965unknown proteinC.G.S.X.
0.023e-136Zea maysZmAffx.302.1.A1_atAI670435--8e-1At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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