Gene omics information

Query gene ID At1g33240
Gene name AT-GTL1 (GT2-LIKE 1)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1811.4At1g33240840218AT-GTL1 (GT2-LIKE 1)Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone.S.X.H.G.
0.6781.6At3g02170821279LNG2 (LONGIFOLIA2)Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.S.X.H.G.
0.2014.4At2g47440819357DNAJ heat shock N-terminal domain-containing proteinF:binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;PMFOBS.X.H.G.
0.2014.4At4g01330828117ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.071.9At3g57800825530basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFBS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.399.7GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
30.499.7GSM131589ATGE_35_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
26.199.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
25.899.7GSM131590ATGE_35_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
14.199.4GSM131507ATGE_12_AGSE5630AtGenExpress: Developmental series (leaves)
11.199.2GSM131508ATGE_12_BGSE5630AtGenExpress: Developmental series (leaves)
11.099.2GSM25316424h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
10.799.2GSM133270RIKEN-GODA6B-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
10.299.2GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.096e-33143At1g76880844023trihelix DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription;C:unknown;OMPFBVC.G.S.X.
0.033e-448At5g28300832914trihelix DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBVAC.G.S.X.
0.011e-346At3g18035821328HON4A linker histone like proteinC.G.S.X.
0.021e-346At2g47260819339WRKY23member of WRKY Transcription Factor; Group IC.G.S.X.
0.024e-344At3g16490820897IQD26 (IQ-domain 26)F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFOMC.G.S.X.
0.024e-344At3g42310823222unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VMPOC.G.S.X.
0.014e-344At2g17970816307oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;PMOBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-552Glycine maxGma.8454.1.S1_atAF372498.1GT-2 factor-8e-16At1g76880trihelix DNA-binding protein, putativeC.G.S.X.
0.025e-446Hordeum vulgareContig12534_atContig12534--4e-1At1g69828-C.G.S.X.
0.028e-344Oryza sativaOs12g01721009640.m00670--5e-1At4g30460glycine-rich proteinC.G.S.X.
0.182e-965Populus trichocarpaPtpAffx.201427.1.S1_atpmrna2820hypothetical protein-1e-9At1g33240AT-GTL1 (GT2-LIKE 1)C.G.S.X.
0.027e-240Triticum aestivumTaAffx.95237.1.S1_atBE430275--3e-13At1g76890-C.G.S.X.
0.033e-756Vitis vinifera1609798_atCB980206hypothetical protein LOC100255432-7e-30At5g28300trihelix DNA-binding protein, putativeC.G.S.X.
0.021e-138Zea maysZm.4487.1.A1_atAI734409SAM-dependent methyltransferase-2e+0At3g53235unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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