CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g32940

Gene name SBT3.5

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.25 22.6 At1g32940 840188 SBT3.5 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM S.X. H.G.
0.50 65.3 At1g15520 838122 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. S.X. H.G.
0.44 57.2 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. S.X. H.G.
0.43 55.3 At1g32960 840190 SBT3.3 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, plant-type cell wall;BPOAFM S.X. H.G.
0.40 50.8 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
134.8 99.9 E-MEXP-739-raw-cel-1099467393
133.5 99.9 E-MEXP-739-raw-cel-1099467321
132.7 99.9 E-MEXP-739-raw-cel-1099467384
122.5 99.9 E-MEXP-739-raw-cel-1099467339
98.2 99.9 GSM134404 St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1 GSE5755 Expression Level Polymorphism Project (ELP) - Tsu-1
92.3 99.9 GSM205160 protoplast_controlDNA_rep2 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
84.5 99.9 GSM134405 St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1 GSE5755 Expression Level Polymorphism Project (ELP) - Tsu-1
83.8 99.9 E-ATMX-25-raw-cel-1441077482
76.6 99.9 E-MEXP-739-raw-cel-1099467375
76.6 99.9 E-MEXP-546-raw-cel-863289424
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.84 0 1304 At1g32950 840189 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM C.G. S.X.
0.83 0 1096 At1g32960 840190 SBT3.3 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, plant-type cell wall;BPOAFM C.G. S.X.
0.69 4e-105 383 At4g10550 826647 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.69 2e-98 361 At4g10540 826646 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM C.G. S.X.
0.65 2e-73 278 At4g10510 826643 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOAFM C.G. S.X.
0.36 1e-22 109 At4g10520 826644 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.37 1e-22 109 At4g10530 826645 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.26 2e-20 101 At1g32970 840191 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 42 Glycine max GmaAffx.73990.1.S1_at BF069116 - - 5e-3 At1g32940 SBT3.5 C.G. S.X.
0.01 9e+0 32 Hordeum vulgare Contig26311_at Contig26311 - - 3e+0 At5g59780 MYB59 (MYB DOMAIN PROTEIN 59) C.G. S.X.
0.05 2e-4 50 Oryza sativa Os04g0121300 CB627086 - Subtilase 2e-3 At4g21326 ATSBT3.12 (SUBTILASE 3.12) C.G. S.X.
0.04 1e-7 59 Populus trichocarpa PtpAffx.201410.1.S1_at pmrna2781 - - 1e-1 At4g21630 subtilase family protein C.G. S.X.
0.02 5e+0 34 Triticum aestivum TaAffx.54364.1.S1_at CA682518 - - 6e+0 At2g32090 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.01 5e+0 32 Vitis vinifera 1618815_at CF513065 hypothetical protein LOC100254079 - 6e-2 At1g23500 GDSL-motif lipase, putative C.G. S.X.
0.01 2e+0 34 Zea mays ZmAffx.445.1.A1_at AI677025 hypothetical protein LOC100193064 - 3e+0 At5g38890 exoribonuclease-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
L GO:0043086 Any process that stops or reduces the activity of an enzyme.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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