Gene omics information

Query gene ID At1g32350
Gene name AOX1D (alternative oxidase 1D)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At1g32350840127AOX1D (alternative oxidase 1D)F:alternative oxidase activity;P:oxidation reduction, response to cyclopentenone;C:mitochondrial envelope, mitochondrion;OPFBMS.X.H.G.
0.8391.4At2g04050814939MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.5570.6At2g04070814943antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:transport, multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.5570.6At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.S.X.H.G.
0.5570.6At1g74870843826protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOBS.X.H.G.
0.5267.4At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOS.X.H.G.
0.5065.3At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseS.X.H.G.
0.4862.5At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFS.X.H.G.
0.4659.8At2g20720816600pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4659.8At3g61630825336CRF6 (CYTOKININ RESPONSE FACTOR 6)CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
317.4100.0GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
246.9100.0GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
223.9100.0GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
222.0100.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
193.1100.0GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
184.5100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
157.599.9GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
146.699.9GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
140.999.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.337e-31135At3g27620822384AOX1Cencodes an isoform of alternate oxidase. expressed in all tissues examined and expression is not induced by antimycin A, an inhibitor of complex III in the mitochondrial respiratory chain.C.G.S.X.
0.149e-1581At5g64210836542AOX2encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.C.G.S.X.
0.301e-1067At3g22360821805AOX1Bencodes an alternative oxidase whose expression is limited to flowers and floral buds.C.G.S.X.
0.165e-756At3g22370821806AOX1A (ALTERNATIVE OXIDASE 1A)Encodes an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited.C.G.S.X.
0.015e-136At4g34060829552DML3 (DEMETER-LIKE PROTEIN 3)Encodes a protein with 5-meC and thymine-DNA glycosylase activity with a preference for CpG and CpHpG sequences. Involved in maintaining methylation marks.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-654Glycine maxGma.1439.1.S1_atX68702.1alternative oxidase-3e-43At3g22360AOX1BC.G.S.X.
0.051e-344Hordeum vulgareContig5888_atContig5888--7e-4At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.096e-550Oryza sativaOs04g0600200AB007452.1-Alternative oxidase 1c, mitochondrial precursor(EC 1.-.-.-)5e-8At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.212e-1067Populus trichocarpaPtp.142.1.S1_atAJ271889.2hypothetical protein-1e-11At3g22360AOX1BC.G.S.X.
0.105e-756Triticum aestivumTa.3379.1.S1_atAB078883.1alternative oxidase-8e-7At1g32350AOX1D (alternative oxidase 1D)C.G.S.X.
0.032e-446Vitis vinifera1607193_atBQ796845hypothetical protein LOC100247765-8e-14At3g27620AOX1CC.G.S.X.
0.063e-652Zea maysZm.13241.1.S1_atAY059647.1alternative oxidase AOX2 precursor-1e-8At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0055114The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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