Gene omics information

Query gene ID At1g32100
Gene name PRR1 (PINORESINOL REDUCTASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At1g32100840102PRR1 (PINORESINOL REDUCTASE 1)Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.S.X.H.G.
0.5773.8At4g05170825865DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFBOMS.X.H.G.
0.3643.6At5g06200830507integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.3541.6At5g42180834223peroxidase 64 (PER64) (P64) (PRXR4)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBMS.X.H.G.
0.3338.1At1g71740843504unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
109.599.9GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
100.499.9GSM266673Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
100.299.9GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
99.399.9GSM184900Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
98.199.9GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
96.799.9GSM266674Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
94.099.9GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
93.399.9GSM184899Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
84.999.9GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
81.899.9GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.772e-114412At4g13660827000PRR2 (PINORESINOL REDUCTASE 2)Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.C.G.S.X.
0.011e-138At5g37010833671unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;MOFBPVAC.G.S.X.
0.011e-138At5g04630830340CYP77A9member of CYP77AC.G.S.X.
0.021e-138At3g50690824233leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.025e-136At5g56340835734zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBC.G.S.X.
0.015e-136At2g02220814753PSKR1 (PHYTOSULFOKIN RECEPTOR 1)Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).C.G.S.X.
0.012e+034At5g41580834160zinc ion bindingF:zinc ion binding;P:unknown;C:unknown;MOFPBVAC.G.S.X.
0.002e+034At4g13750827009ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOBFAC.G.S.X.
0.022e+034At4g35250829678vestitone reductase-relatedF:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast;BOPFMAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Glycine maxGmaAffx.90356.1.S1_s_atCF806081--1e-3At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
0.132e-859Hordeum vulgareContig12212_atContig12212--4e-8At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.103e-1687Oryza sativaOs12g0265100AK065317.1-Pinoresinol-lariciresinol reductase TH22e-16At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.053e-344Populus trichocarpaPtp.644.1.S1_atCV228278phenylcoumaran benzylic ether reductase -like protein-4e-8At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
0.186e-1065Triticum aestivumTa.1727.2.S1_atBJ255891--3e-10At1g32100PRR1 (PINORESINOL REDUCTASE 1)C.G.S.X.
0.036e-754Vitis vinifera1610853_atCF213516isoflavone reductase-like protein 1-3e-6At4g34540isoflavone reductase family proteinC.G.S.X.
0.109e-1063Zea maysZm.12422.1.S1_atAW400260--9e-9At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009807The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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