Gene omics information

Query gene ID At1g31710
Gene name copper amine oxidase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At1g31710840058copper amine oxidase, putativeF:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAS.X.H.G.
0.7385.5At3g16390820886NSP3 (NITRILE SPECIFIER PROTEIN 3)Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.S.X.H.G.
0.6781.6At3g16450820893jacalin lectin family proteinF:molecular_function unknown;P:response to cold;C:nucleus;POS.X.H.G.
0.5368.6At3g15950820839NAI2Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies.S.X.H.G.
0.5267.4At4g27860828899integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;POMBFS.X.H.G.
0.5267.4At4g29270829048acid phosphatase class B family proteinF:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOS.X.H.G.
0.5065.3At2g22770816807NAI1regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.S.X.H.G.
0.5065.3At2g39310818516JAL22 (JACALIN-RELATED LECTIN 22)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5065.3At3g16420820890PBP1 (PYK10-BINDING PROTEIN 1)The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.S.X.H.G.
0.4761.2At1g76790844013O-methyltransferase family 2 proteinF:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFOMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.099.9GSM131643ATGE_2_AGSE5633AtGenExpress: Developmental series (shoots and stems)
81.199.9GSM131644ATGE_2_BGSE5633AtGenExpress: Developmental series (shoots and stems)
78.799.9GSM131645ATGE_2_CGSE5633AtGenExpress: Developmental series (shoots and stems)
33.499.7GSM133137S1500_2H_AGSE5688AtGenExpress: Response to sulfate limitation
29.399.7GSM133125S0_2H_AGSE5688AtGenExpress: Response to sulfate limitation
29.199.7GSM133126S0_2H_BGSE5688AtGenExpress: Response to sulfate limitation
28.399.7GSM131206AtGen_D-40_3-WL_REP3_ATH1GSE5617AtGenExpress: Light treatments
27.599.7GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatments
27.399.7GSM133139S1500_4H_AGSE5688AtGenExpress: Response to sulfate limitation
26.599.7GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.720989At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAC.G.S.X.
0.671e-92341At1g31670840054copper amine oxidase, putativeF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAC.G.S.X.
0.017e-240At4g12270826835copper amine oxidase family proteinF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBPOMAC.G.S.X.
0.017e-240At4g12290826838amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:vacuole;FBMOPAC.G.S.X.
0.043e-138At4g14940827152ATAO1 (ARABIDOPSIS THALIANA AMINE OXIDASE 1)atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development.C.G.S.X.
0.013e-138At3g27430822364PBB1Encodes 20S proteasome beta subunit PBB1 (PBB1).C.G.S.X.
0.013e-138At1g50840841506POLGAMMA2 (polymerase gamma 2)DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation.C.G.S.X.
0.011e+036At5g66490836781unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-138Glycine maxGma.4659.1.S1_atAW100643--2e-7At1g31690amine oxidase/ copper ion binding / quinone bindingC.G.S.X.
0.013e-240Hordeum vulgareContig24387_atContig24387--1e+0At5g23310FSD3 (FE SUPEROXIDE DISMUTASE 3)C.G.S.X.
0.018e+034Oryza sativaOsAffx.9912.1.S1_at---0C.G.S.X.
0.041e+036Populus trichocarpaPtpAffx.158132.1.A1_atCV282478hypothetical protein-3e-12At3g43670copper amine oxidase, putativeC.G.S.X.
0.012e+132Triticum aestivumTaAffx.6302.1.S1_atCA688560--4e+0At3g03600RPS2 (RIBOSOMAL PROTEIN S2)C.G.S.X.
0.025e+032Vitis vinifera1622424_atCA813635hypothetical protein LOC100265980-9e-11At5g44200CBP20 (CAP-BINDING PROTEIN 20)C.G.S.X.
0.014e-136Zea maysZm.19043.1.S1_atAY109466.1--1e-1At3g50550unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0009308The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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