Gene omics information

Query gene ID At1g31640
Gene name AGL92 (AGAMOUS-LIKE 92)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4862.5At1g31640840051AGL92 (AGAMOUS-LIKE 92)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFBS.X.H.G.
0.6982.9At2g053903768626transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6478.9At5g47260834773ATP binding / GTP binding / nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, GTP binding, nucleotide binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:cellular_component unknown;PMBOFAS.X.H.G.
0.6478.9At1g426503767267transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6277.3At5g28590832956DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.6075.7At1g269903766802transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5873.8At4g024903769793transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5873.8At1g41870840798transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5873.8At2g16690816170transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5570.6At5g28550832952-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1142.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
973.0100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
858.3100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
813.4100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
167.6100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
35.399.7GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
26.199.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
25.499.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
21.299.6GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
19.999.6GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.488e-118424At1g31630840050AGL86 (AGAMOUS-LIKE 86)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFBC.G.S.X.
0.374e-30133At1g33070840203sequence-specific DNA binding / transcription factorF:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PC.G.S.X.
0.123e-963At5g27960832865MADS-box protein (AGL90)F:transcription factor activity, DNA binding;P:N-terminal protein myristoylation, regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
0.085e-859At5g26580832732AGL34Type I member of MADs box domain transcription factor family. This class lacks the K-domain required for dimerization that is characteristic of class II MADS box proteins.C.G.S.X.
0.102e-448At5g26650832724AGL36 (AGAMOUS-LIKE 36)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOC.G.S.X.
0.033e-344At5g35120833465unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.054e-240At1g65330842841PHE1 (PHERES1)Type I MADS-box protein, regulated by MEA and FIE, expressed transiently after fertilization in embryo and endosperm.C.G.S.X.
0.022e-138At4g21790828267TOM1 (TOBAMOVIRUS MULTIPLICATION 1)encodes a host factor that is required for TMV virus multiplication.C.G.S.X.
0.017e-136At5g49950835059embryogenesis-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOMFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-240Glycine maxHgAffx.16739.1.S1_atCB374838--6e-2At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)C.G.S.X.
0.021e+034Hordeum vulgareHF23D07r_x_atHF23D07r--3e+0At1g68185ubiquitin-relatedC.G.S.X.
0.021e+036Oryza sativaOs01g0678800AK062840.1-Heavy metal transport/detoxification proteindomain containing protein3e-1At1g20220nucleic acid bindingC.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.988.1.A1_atCV257819chorismate mutase-3e-11At5g10870ATCM2 (chorismate mutase 2)C.G.S.X.
0.027e-136Triticum aestivumTa.15933.1.S1_atCA501665--4e+0At5g19315-C.G.S.X.
0.022e-136Vitis vinifera1608702_atCD798542--2e-2At1g60985SCRL6 (SCR-Like 6)C.G.S.X.
0.025e+032Zea maysZmAffx.261.1.A1_atAI670366hypothetical protein LOC100277543-8e-1At1g03440leucine-rich repeat family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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