Gene omics information

Query gene ID At1g31060
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At1g31060839992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.6277.3At4g25090828612respiratory burst oxidase, putative / NADPH oxidase, putativeF:in 7 functions;P:oxidation reduction;C:cytosolic ribosome, vacuole;MFPBOAS.X.H.G.
0.5974.7At1g49310841354unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5974.7At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)S.X.H.G.
0.5974.7At5g22890832353zinc finger (C2H2 type) family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPFS.X.H.G.
0.5873.8At2g308408176352-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseS.X.H.G.
0.5773.8At2g44010819006unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At3g45410823679lectin protein kinase family proteinencodes a receptor-like kinase that has serine/threonine kinase activity whose expression is induced by high salt stress. This induction is inhibited by tobacco ethylene receptor.S.X.H.G.
0.5773.8At1g13300837890myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMFS.X.H.G.
0.5570.6At2g42350818836zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
203.6100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
56.999.8GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
56.799.8GSM75516slr-1 0h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
52.599.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
52.399.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
49.499.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.099.8GSM291024root - 08% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
45.599.8GSM291119root - 21% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
45.199.8GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
43.399.8GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-134At1g54270841868EIF4A-2member of eIF4A - eukaryotic initiation factor 4AC.G.S.X.
0.012e+032At5g60250836147zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MFPOBC.G.S.X.
0.052e+032At5g46010834641homeobox-leucine zipper transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:vacuole;PC.G.S.X.
0.012e+032At5g66960836830prolyl oligopeptidase family proteinF:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:membrane;OBMPFAVC.G.S.X.
0.012e+032At4g16050827290unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAC.G.S.X.
0.012e+032At4g29440829065unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.022e+032At4g27780828891ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2)Encodes acyl-CoA-binding protein with ankyrin repeatsC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-238Glycine maxHgAffx.5151.1.S1_atCD748273--8e-2At1g31060unknown proteinC.G.S.X.
0.081e-342Hordeum vulgareS0000200079C09F1_s_atS0000200079C09F1--2e-3At1g31060unknown proteinC.G.S.X.
0.061e+034Oryza sativaOsAffx.17660.1.S1_at---0C.G.S.X.
0.053e+032Populus trichocarpaPtpAffx.45541.1.S1_atCK106014--1e+0At5g64210AOX2C.G.S.X.
0.052e-136Triticum aestivumTaAffx.79349.1.S1_atCA717782--2e-1At1g31060unknown proteinC.G.S.X.
0.047e-132Vitis vinifera1620809_atCF404050hypothetical protein LOC100252547-9e-1At1g25370unknown proteinC.G.S.X.
0.044e+030Zea maysZm.5851.9.A1_atAY105349.1--4e+0At5g21970ubiquitin thiolesteraseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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