Gene omics information

Query gene ID At1g30960
Gene name GTP-binding protein (ERG)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7486.1At1g30960839983GTP-binding protein (ERG)F:RNA binding, GTP binding;P:unknown;C:cytosol;BOMPFAS.X.H.G.
0.7184.2At3g21540821708transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:rRNA processing;C:nucleolus, heterotrimeric G-protein complex;MFOPBAS.X.H.G.
0.6478.9At1g03360839521ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4)F:RNA binding, exonuclease activity;P:unknown;C:mitochondrion;OMAFPS.X.H.G.
0.6378.1At2g19385816457zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPBS.X.H.G.
0.6378.1At5g52380835314zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFVOPS.X.H.G.
0.6277.3At2g34570818021MEE21 (maternal effect embryo arrest 21)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;MFOPS.X.H.G.
0.6075.7At3g11964820370RNA bindingF:RNA binding;P:mRNA processing, RNA processing;C:nucleolus, plasma membrane;BOMFPAS.X.H.G.
0.6075.7At4g02400828039-F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;MOFBPVAS.X.H.G.
0.5873.8At3g12270820407PRMT3 (PROTEIN ARGININE METHYLTRANSFERASE 3)F:methyltransferase activity, zinc ion binding;P:metabolic process;C:intracellular;MBOFPAS.X.H.G.
0.5773.8At1g06720837182-F:unknown;P:ribosome biogenesis;C:nucleus;OMFBPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
196.5100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
155.399.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
114.999.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
108.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
105.099.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.699.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
95.199.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
91.399.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
84.099.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
83.899.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.027e-446At3g07210819909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMBC.G.S.X.
0.022e-138At4g12370826846unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-136At5g24260832493prolyl oligopeptidase family proteinF:serine-type peptidase activity;P:proteolysis;C:membrane;BOMFAPC.G.S.X.
0.027e-136At5g54360835524zinc finger (C2H2 type) family protein-relatedF:transcription factor activity;P:regulation of transcription;C:intracellular, chloroplast;PC.G.S.X.
0.017e-136At5g22090832270unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOPFBVC.G.S.X.
0.017e-136At1g04050839320SUVR1 (ARABIDOPSIS HOMOLOG OF SU(VAR)3-9 1)Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.C.G.S.X.
0.017e-136At1g10720837615BSD domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFVBC.G.S.X.
0.017e-136At1g74770843816protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFVBC.G.S.X.
0.013e+034At4g32790829415exostosin family proteinF:catalytic activity;P:biological_process unknown;C:mitochondrion, membrane;PMOBVFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.51287.3.S1_atBE331193--3e-7At4g20980eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putativeC.G.S.X.
0.042e-240Hordeum vulgareContig15500_atContig15500--4e-2At1g30960GTP-binding protein (ERG)C.G.S.X.
0.066e-654Oryza sativaOs08g0207600AK073315.1-GTP-binding protein ERG4e-6At1g30960GTP-binding protein (ERG)C.G.S.X.
0.394e-52206Populus trichocarpaPtpAffx.7307.1.S1_atCK091386hypothetical protein-4e-52At1g30960GTP-binding protein (ERG)C.G.S.X.
0.034e-240Triticum aestivumTa.28968.1.S1_atBE399523--3e-2At1g30960GTP-binding protein (ERG)C.G.S.X.
0.023e+032Vitis vinifera1619605_atCF373050hypothetical protein LOC100262085-3e+0At1g29530unknown proteinC.G.S.X.
0.021e+034Zea maysZm.2794.1.A1_atAW067284--1e+0At3g05600epoxide hydrolase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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