CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g30650

Gene name WRKY14

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.57 73.8 At1g30650 839945 WRKY14 member of WRKY Transcription Factor; Group II-e S.X. H.G.
0.55 70.6 At5g18860 832004 inosine-uridine preferring nucleoside hydrolase family protein F:hydrolase activity;P:biological_process unknown;C:cell wall;BOMPFA S.X. H.G.
0.53 68.6 At1g50560 841477 CYP705A25 member of CYP705A S.X. H.G.
0.53 68.6 At5g06300 830518 carboxy-lyase F:carboxy-lyase activity;P:metabolic process;C:unknown;BOPFMA S.X. H.G.
0.49 63.5 At2g26650 817206 AKT1 (ARABIDOPSIS K TRANSPORTER 1) Shaker-like inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. S.X. H.G.
0.49 63.5 At3g04570 819613 DNA-binding protein-related F:unknown;P:biological_process unknown;C:unknown;BPMOFVA S.X. H.G.
0.49 63.5 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.48 62.5 At1g18910 838472 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBV S.X. H.G.
0.48 62.5 At2g45430 819151 DNA-binding protein-related F:unknown;P:biological_process unknown;C:unknown;PMFBO S.X. H.G.
0.44 57.2 At1g73280 843662 scpl3 (serine carboxypeptidase-like 3) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
115.0 99.9 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
94.3 99.9 GSM133962 Fukuda_1-7_6A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
93.8 99.9 GSM133960 Fukuda_1-5_4A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
92.7 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
83.3 99.9 GSM133959 Fukuda_1-4_2B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
73.9 99.9 GSM133958 Fukuda_1-3_2A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
72.9 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
72.6 99.9 GSM133963 Fukuda_1-8_6B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
72.4 99.9 GSM133961 Fukuda_1-6_4B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
69.4 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.42 2e-78 293 At2g34830 818048 WRKY35 (WRKY DNA-binding protein 35) member of WRKY Transcription Factor; Group II-e C.G. S.X.
0.09 6e-29 129 At5g52830 835360 WRKY27 Encodes a WRKY transcription factor WRKY27. Mutation in Arabidopsis WRKY27 results in delayed symptom development in response to the bacterial wilt pathogen Ralstonia solanacearum. C.G. S.X.
0.09 8e-22 105 At4g23550 828455 WRKY29 Encodes WRKY DNA-binding protein 29 (WRKY29). C.G. S.X.
0.04 2e-13 77 At5g45050 834536 TTR1 Encodes a member of WRKY Transcription Factor (Group II-e) that confers resistance to tobacco ringspot nepovirus. C.G. S.X.
0.08 7e-10 65 At3g58710 825040 WRKY69 member of WRKY Transcription Factor; Group II-e C.G. S.X.
0.04 4e-5 50 At5g45260 834562 RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1) Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2. C.G. S.X.
0.03 4e-5 50 At4g24240 828525 WRKY7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 4e-9 63 Glycine max Gma.16679.1.S1_at BM520158 WRKY8 protein - 2e-9 At1g30650 WRKY14 C.G. S.X.
0.02 8e-2 38 Hordeum vulgare Contig23655_at Contig23655 - - 5e+0 At3g51810 EM1 (LATE EMBRYOGENESIS ABUNDANT 1) C.G. S.X.
0.12 3e-17 91 Oryza sativa Os04g0597300 AK110912.1 - DNA-binding WRKY domain containing protein 3e-25 At2g34830 WRKY35 (WRKY DNA-binding protein 35) C.G. S.X.
0.26 4e-9 63 Populus trichocarpa PtpAffx.218725.1.S1_x_at pmrna34447 hypothetical protein - 6e-10 At1g30650 WRKY14 C.G. S.X.
0.02 7e-1 36 Triticum aestivum TaAffx.94236.1.S1_at CA731347 - - 3e-1 At1g30650 WRKY14 C.G. S.X.
0.03 5e-2 38 Vitis vinifera 1612068_at CF405105 - - 2e-16 At5g62690 TUB2 C.G. S.X.
0.03 3e-1 36 Zea mays Zm.10513.2.S1_a_at AY106791.1 hypothetical protein LOC100277818 - 3e-3 At1g68390 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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