CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g30135

Gene name JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.87 93.5 At1g30135 839893 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.91 95.6 At5g66620 836794 DAR6 (DA1-RELATED PROTEIN 6) F:zinc ion binding;P:unknown;C:unknown;MOBFPVA S.X. H.G.
0.90 95.1 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. S.X. H.G.
0.90 95.1 At1g22810 838887 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. S.X. H.G.
0.87 93.5 At1g30370 839917 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMV S.X. H.G.
0.86 93.1 At5g66640 836796 DAR3 (DA1-RELATED PROTEIN 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF S.X. H.G.
0.85 92.4 At2g34600 818025 JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7) F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P S.X. H.G.
0.85 92.4 At2g20350 816554 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. S.X. H.G.
0.84 91.9 At1g61460 842440 S-locus protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVA S.X. H.G.
0.84 91.9 At2g22760 816806 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
556.6 100.0 E-MEXP-807-raw-cel-1173273088
540.2 100.0 E-MEXP-807-raw-cel-1173273196
501.5 100.0 E-MEXP-807-raw-cel-1173273223
467.8 100.0 E-MEXP-807-raw-cel-1173273116
455.3 100.0 E-MEXP-807-raw-cel-1173273060
307.9 100.0 E-MEXP-807-raw-cel-1173273170
155.3 99.9 E-MEXP-807-raw-cel-1173273144
119.1 99.9 E-MEXP-807-raw-cel-1173273252
83.9 99.9 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
80.9 99.9 E-MEXP-509-raw-cel-829148456
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.46 1e-11 69 At2g34600 818025 JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7) F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P C.G. S.X.
0.02 2e-1 36 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A C.G. S.X.
0.02 2e-1 36 At3g46220 823767 unknown protein F:unknown;P:biological_process unknown;C:unknown;MOFPBVA C.G. S.X.
0.03 2e-1 36 At1g14680 838030 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV C.G. S.X.
0.01 8e-1 34 At4g38070 829963 bHLH family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:mitochondrion;MOBFPAV C.G. S.X.
0.02 8e-1 34 At4g09740 826560 AtGH9B14 (Arabidopsis thaliana glycosyl hydrolase 9B14) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF C.G. S.X.
0.02 8e-1 34 At3g45680 823710 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF C.G. S.X.
0.02 8e-1 34 At3g45720 823714 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e+0 34 Glycine max GmaAffx.24362.1.A1_at BU544892 - - 8e-1 At1g30135 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig25896_at Contig25896 - - 5e+0 At4g13100 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa Os10g0540000 AK063094.1 - Hypothetical protein 3e-3 At1g15840 unknown protein C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.82368.1.A1_a_at CV249469 - - 3e-1 At1g30135 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) C.G. S.X.
0.04 3e+0 32 Triticum aestivum TaAffx.108160.1.S1_at CA691128 - - 4e+0 At4g09840 unknown protein C.G. S.X.
0.03 6e-2 36 Vitis vinifera 1620573_at CB836894 - - 1e+0 At1g15790 unknown protein C.G. S.X.
0.04 5e+0 30 Zea mays ZmAffx.1379.1.S1_at 40794996-54 - - 1e+1 At4g38781 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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