Gene omics information

Query gene ID At1g29680
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g29680839845unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFS.X.H.G.
0.8994.6At5g55240835617caleosin-related family protein / embryo-specific protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFOS.X.H.G.
0.8793.5At4g10020826593AtHSD5 (hydroxysteroid dehydrogenase 5)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVS.X.H.G.
0.7888.6At2g33520817917-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.7788.0At2g23640816896reticulon family protein (RTNLB13)F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOS.X.H.G.
0.7385.5At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.6982.9At1g05510837053-Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
0.6982.9At5g45690834608unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFS.X.H.G.
0.6882.2At5g55750835669hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.6478.9At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
613.0100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
531.0100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
310.7100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
277.4100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
251.5100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
243.9100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
232.8100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
221.7100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
211.9100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
208.8100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.102e-550At5g45690834608unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFC.G.S.X.
0.023e-136At5g19680832088leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.033e-136At4g18920827627unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFC.G.S.X.
0.013e-136At1g01660839461U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:ubiquitin ligase complex;MOBFPAVC.G.S.X.
0.023e-136At1g75430843879BLH11 (BEL1-LIKE HOMEODOMAIN 11)F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.011e+034At4g38590830016glycosyl hydrolase family 35 proteinputative beta-galactosidase (BGAL14 gene)C.G.S.X.
0.021e+034At4g22150828304PUX3Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3)C.G.S.X.
0.021e+034At3g54470824612uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesisC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-136Glycine maxGmaAffx.29786.1.S1_atAI748057beta-amyrin and sophoradiol 24-hydroxylase-6e-13At1g34020transporter-relatedC.G.S.X.
0.032e-136Hordeum vulgareContig6446_atContig6446--5e-1At1g29680unknown proteinC.G.S.X.
0.084e-240Oryza sativaOs01g0728700AK108000.1-Conserved hypothetical protein3e-2At1g29680unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.103721.1.A1_atCK095041--7e-1At1g29680unknown proteinC.G.S.X.
0.044e-136Triticum aestivumTaAffx.51867.1.S1_atCA717368--2e-1At1g29680unknown proteinC.G.S.X.
0.121e-446Vitis vinifera1613370_atCB346796hypothetical protein LOC100246418-5e-4At1g29680unknown proteinC.G.S.X.
0.032e+032Zea maysZm.6289.1.A1_atAI691267--4e+0At4g19620unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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