CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g29510

Gene name SAUR68 (SMALL AUXIN UPREGULATED 68)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.78 88.6 At1g29510 839828 SAUR68 (SMALL AUXIN UPREGULATED 68) F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P S.X. H.G.
0.88 94.0 At1g29500 839827 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:nucleolus, nucleus;P S.X. H.G.
0.82 90.9 At1g29450 839821 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P S.X. H.G.
0.80 89.8 At3g03830 821123 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO S.X. H.G.
0.80 89.8 At5g18060 831310 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO S.X. H.G.
0.78 88.6 At3g03840 821121 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO S.X. H.G.
0.67 81.6 At1g29440 839820 - F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P S.X. H.G.
0.63 78.1 At2g21200 816657 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
71.5 99.9 GSM62696 Columbia flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression
59.9 99.8 GSM142602 BD001_ATH1_A6-DAVIE-T14 GSE6149 Targets of the mci genes.
58.7 99.8 GSM173445 oxt6 mutant, biological rep1 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
57.7 99.8 GSM173447 oxt6 mutant, biological rep3 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
43.7 99.8 GSM173446 oxt6 mutant, biological rep2 GSE7211 A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
43.3 99.8 E-MEXP-265-raw-cel-414618693
42.9 99.8 GSM142600 BD001_ATH1_A4-DAVIE-T13 GSE6149 Targets of the mci genes.
41.9 99.8 GSM142599 BD001_ATH1_A3-DAVIE-T13 GSE6149 Targets of the mci genes.
38.4 99.8 GSM142601 BD001_ATH1_A5-DAVIE-T14 GSE6149 Targets of the mci genes.
38.3 99.8 GSM142597 BD001_ATH1_A1-DAVIE-CON GSE6149 Targets of the mci genes.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.81 6e-165 579 At1g29440 839820 - F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P C.G. S.X.
0.78 3e-114 410 At5g27780 832840 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P C.G. S.X.
0.76 3e-114 410 At1g29430 839819 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P C.G. S.X.
0.77 4e-92 337 At1g29420 839818 - F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;P C.G. S.X.
0.79 7e-66 250 At1g29450 839821 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P C.G. S.X.
0.66 7e-66 250 At1g29460 839822 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;P C.G. S.X.
0.79 7e-60 230 At1g29500 839827 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:nucleolus, nucleus;P C.G. S.X.
0.71 6e-54 210 At1g29490 839826 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Glycine max GmaAffx.36862.1.A1_at BI971211 - - 3e+0 At1g29510 SAUR68 (SMALL AUXIN UPREGULATED 68) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBro04_SQ003_C17_at EBro04_SQ003_C17 - - 3e+0 At5g63240 glycosyl hydrolase family protein 17 C.G. S.X.
0.03 6e+0 32 Oryza sativa OsAffx.22135.1.S1_x_at - - - 0 C.G. S.X.
0.03 2e-2 40 Populus trichocarpa PtpAffx.249.182.S1_s_at CV234165 hypothetical protein - 5e-44 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative C.G. S.X.
0.04 9e-1 34 Triticum aestivum TaAffx.112309.1.S1_at CA625009 - - 9e-1 At1g29440 - C.G. S.X.
0.03 2e-1 34 Vitis vinifera 1619248_at CA813733 hypothetical protein LOC100264750 - 3e-1 At5g18100 CSD3 (copper/zinc superoxide dismutase 3) C.G. S.X.
0.02 6e+0 30 Zea mays Zm.6652.1.A1_at BM347691 ribosomal protein rpS20 - 1e-1 At3g15190 chloroplast 30S ribosomal protein S20, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0009733 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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