Gene omics information

Query gene ID At1g29480
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At1g29480839825unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPS.X.H.G.
0.9296.0At3g308463769163transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.8391.4At5g28950833021unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.7184.2At2g111653768074transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6378.1At5g34895833430transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5974.7At1g36670840575transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5570.6At3g47270823880transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
283.5100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
283.5100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
253.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
252.7100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
244.9100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
235.5100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
231.0100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
214.5100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
208.9100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
190.3100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-136At5g57480835852AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.013e-136At1g69990843336leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAC.G.S.X.
0.031e+034At5g22545832316unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.011e+034At3g10550820220phosphatase/ protein tyrosine phosphataseF:phosphatase activity, protein tyrosine phosphatase activity;P:dephosphorylation;C:cellular_component unknown;MOFPC.G.S.X.
0.021e+034At3g22430821813unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBPFVAC.G.S.X.
0.011e+034At3g60860825257guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBC.G.S.X.
0.011e+034At3g20580821605COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PC.G.S.X.
0.021e+034At2g34960818060CAT5 (CATIONIC AMINO ACID TRANSPORTER 5)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane.C.G.S.X.
0.021e+034At2g28380817386DRB2 (DSRNA-BINDING PROTEIN 2)Encodes a cytoplasmic dsRNA-binding protein.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-240Glycine maxGma.17766.3.A1_atBI472161--1e-5At3g02730TRXF1 (THIOREDOXIN F-TYPE 1)C.G.S.X.
0.036e-134Hordeum vulgareContig16686_atContig16686--7e-3At3g23620brix domain-containing proteinC.G.S.X.
0.027e-136Oryza sativaOs07g0250900AK107935.1-Harpin-induced 1 domain containing protein3e-2At1g36940unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.65236.1.A1_atCK087944hypothetical protein-2e-1At5g19630unknown proteinC.G.S.X.
0.035e+032Triticum aestivumTaAffx.7945.1.S1_atCA643198--2e+0Atmg01370-C.G.S.X.
0.034e-134Vitis vinifera1615507_atCF214611hypothetical protein LOC100248922-9e-1At5g06860PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)C.G.S.X.
0.026e-134Zea maysZm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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