Gene omics information

Query gene ID At1g29440
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g29440839820-F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PS.X.H.G.
0.9296.0At1g29500839827auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:nucleolus, nucleus;PS.X.H.G.
0.9195.6At1g29510839828SAUR68 (SMALL AUXIN UPREGULATED 68)F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PS.X.H.G.
0.8089.8At1g29430839819auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PS.X.H.G.
0.8089.8At1g29460839822auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;PS.X.H.G.
0.8089.8At3g03840821121auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
0.7184.2At5g18060831310auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
403.1100.0GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
323.5100.0GSM173446oxt6 mutant, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
234.8100.0GSM173445oxt6 mutant, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
59.099.8E-MEXP-715-raw-cel-1121836113
52.899.8E-MEXP-715-raw-cel-1121836247
47.399.8E-ATMX-33-raw-cel-1562596288
39.899.8GSM133859Beynon_1-2-cat-SpikeMix2_Rep1_ATH1GSE5739Comparison of CATMA, Affymetrix and Agilent arrays
34.399.7GSM133860Beynon_1-3-cat-SpikeMix3_Rep1_ATH1GSE5739Comparison of CATMA, Affymetrix and Agilent arrays
33.099.7GSM139895WT_non-polysome_rep1GSE6024eif3h/WT polysome loading
28.199.7GSM133865Beynon_1-8-cat-ReferenceMix_Rep1_ATH1GSE5739Comparison of CATMA, Affymetrix and Agilent arrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.816e-165579At1g29510839828SAUR68 (SMALL AUXIN UPREGULATED 68)F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.901e-138492At1g29430839819auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.917e-134476At5g27780832840auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.771e-70266At1g29420839818-F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PC.G.S.X.
0.763e-59228At1g29500839827auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:nucleolus, nucleus;PC.G.S.X.
0.761e-52206At1g29460839822auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;PC.G.S.X.
0.644e-46184At1g29490839826auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.742e-44178At1g29450839821auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.012e-136At4g30991-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Glycine maxHgAffx.19105.1.S1_atCA940075--8e-1At1g55330AGP21C.G.S.X.
0.042e+032Hordeum vulgareHT10O19r_atHT10O19r--1e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.046e+032Oryza sativaOs10g01557669638.m00591--1e-1At5g45040cytochrome c6 (ATC6)C.G.S.X.
0.057e-238Populus trichocarpaPtpAffx.205625.1.S1_atpmrna11116SAUR family protein-2e-4At1g29500auxin-responsive protein, putativeC.G.S.X.
0.048e-134Triticum aestivumTaAffx.58748.1.S1_atCA616579--4e-6At2g14285-C.G.S.X.
0.042e-134Vitis vinifera1619248_atCA813733hypothetical protein LOC100264750-3e-1At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.046e+030Zea maysZmAffx.1080.1.A1_atAI948353--7e-1At1g22790unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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