Gene omics information

Query gene ID At1g28760
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.157.8At1g28760839772unknown proteinF:unknown;P:unknown;C:unknown;MPS.X.H.G.
0.5773.8At3g51320824295-F:unknown;P:biological_process unknown;C:unknown;POMFS.X.H.G.
0.3235.7At3g14730820701pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFS.X.H.G.
0.2217.5At1g11900837738pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POFMBAS.X.H.G.
0.135.8At4g04790825816-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
179.6100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
156.799.9GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
104.899.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
66.199.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
63.999.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
63.199.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
60.799.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
57.799.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.599.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
54.499.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-448At5g67610836897unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOC.G.S.X.
0.022e-448At1g57800842155VIM5 (VARIANT IN METHYLATION 5)predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH3/VIM5 cDNA through RT-PCR were unsuccessful and only one Arabidopsis EST is associated with this locus.C.G.S.X.
0.014e-240At4g24200828521-F:unknown;P:unknown;C:mitochondrion;OBMFPC.G.S.X.
0.014e-240At3g62590825433lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFMBC.G.S.X.
0.017e-136At5g44820834512unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.017e-136At5g19320832052RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2)Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.C.G.S.X.
0.017e-136At5g02170831896amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-242Glycine maxGmaAffx.29083.2.S1_atBG362669--4e-3At1g28760unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareHM08L19r_atHM08L19r--3e-2At3g09980unknown proteinC.G.S.X.
0.024e-448Oryza sativaOs03g0654500AK066127.1--3e-4At1g28760unknown proteinC.G.S.X.
0.023e-138Populus trichocarpaPtpAffx.202284.1.S1_atpmrna4570hypothetical protein-5e-1At5g46780VQ motif-containing proteinC.G.S.X.
0.027e-136Triticum aestivumTa.25722.1.A1_atCD374046--2e-2At2g30590WRKY21C.G.S.X.
0.025e-238Vitis vinifera1613934_s_atCA814354hypothetical protein LOC100260053-1e+1Atmg01370-C.G.S.X.
0.025e+032Zea maysZmAffx.278.1.A1_atAI670406--8e-1At1g73875endonuclease/exonuclease/phosphatase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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