Gene omics information

Query gene ID At1g28610
Gene name GDSL-motif lipase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g28610839761GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBMS.X.H.G.
0.4659.8At4g10000826591electron carrier/ protein disulfide oxidoreductaseF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:chloroplast;BOPAFMS.X.H.G.
0.4558.3At1g18360838417hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:chloroplast;BOPMFVAS.X.H.G.
0.4355.3At1g28140839708unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPMOS.X.H.G.
0.4253.9At4g18520827584-F:unknown;P:biological_process unknown;C:unknown;POMFBS.X.H.G.
0.4152.4At5g39830833979DEG8Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II.S.X.H.G.
0.4050.8At5g55990835697CBL2 (CALCINEURIN B-LIKE 2)Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.S.X.H.G.
0.3846.7At1g76020843933-F:unknown;P:biological_process unknown;C:cell wall, vacuole;BPOMFS.X.H.G.
0.3745.0At1g74640843803unknown proteinF:unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;BPAOS.X.H.G.
0.3745.0At3g17930819775unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane;BOPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
143.199.9GSM38670DSNPGSE2268Arabidopsis polysome microarray
75.199.9GSM38668NSNPGSE2268Arabidopsis polysome microarray
31.099.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.599.7E-TABM-52-raw-cel-1583683342
29.499.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
26.899.7E-MEXP-557-raw-cel-879731547
24.899.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
24.499.6GSM134365St.Clair_1-26_371_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1
24.099.6GSM134363St.Clair_1-24_437_Cvi-1_0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1
24.099.6E-MEXP-557-raw-cel-879731493
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.484e-121434At1g28600839760lipase, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cell wall;PBOMC.G.S.X.
0.493e-88325At1g28590839759lipase, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.476e-74278At2g27360817279lipase, putativeF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.401e-62240At1g28580839758GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBOFMC.G.S.X.
0.468e-58224At1g31550840045GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBFOMC.G.S.X.
0.391e-56220At1g28570839757GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e+032Glycine maxGmaAffx.80740.1.S1_atBE191498--9e-1At1g29410PAI3 (phosphoribosylanthranilate isomerase 3)C.G.S.X.
0.043e-342Hordeum vulgareContig13714_atContig13714--6e-4At2g27360lipase, putativeC.G.S.X.
0.088e-446Oryza sativaOs01g0330100AK100480.1--2e-3At1g28610GDSL-motif lipase, putativeC.G.S.X.
0.045e-136Populus trichocarpaPtpAffx.203847.1.S1_s_atpmrna7594hypothetical protein-5e-1At1g28610GDSL-motif lipase, putativeC.G.S.X.
0.042e+034Triticum aestivumTaAffx.92589.1.S1_atCA633836--5e-3At1g28640GDSL-motif lipase, putativeC.G.S.X.
0.067e-340Vitis vinifera1608244_atCF568844--7e-5At1g28570GDSL-motif lipase, putativeC.G.S.X.
0.036e-134Zea maysZm.2974.1.A1_atAW120131--1e+0At1g28610GDSL-motif lipase, putativeC.G.S.X.
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Biological processes



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ECCGO IDProcess Name
LGO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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