Gene omics information

Query gene ID At1g28440
Gene name HSL1 (HAESA-Like 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At1g28440839742HSL1 (HAESA-Like 1)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVAS.X.H.G.
0.3133.8At1g05150839312calcium-binding EF hand family proteinF:binding, zinc ion binding, calcium ion binding;P:biological_process unknown;C:plasma membrane;BOMAPFS.X.H.G.
0.2014.4At4g35920829747MCA1 (mid1-complementing activity 1)Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.S.X.H.G.
0.114.1At1g27190839608leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:nucleus, plasma membrane;PMOBFVAS.X.H.G.
0.061.4At5g01020831918protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.040.9At1g47740841185unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.499.5GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
14.799.4GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
11.399.3GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.899.2GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
10.499.2E-MEXP-265-raw-cel-414617783
10.299.2GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.299.1GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
8.799.0GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
7.498.8GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
7.098.7E-MEXP-265-raw-cel-414617890
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.053e-552At4g28490828967HAE (HAESA)member of Receptor kinase-like protein familyC.G.S.X.
0.014e-448At5g49660835028leucine-rich repeat transmembrane protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-448At5g65700836699BAM1 (BARELY ANY MERISTEM 1)Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.C.G.S.X.
0.012e-346At5g44700834499GSO2 (GASSHO 2)Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.C.G.S.X.
0.012e-346At2g19130816430S-locus lectin protein kinase family proteinF:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-346At1g68400843169leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.016e-344At1g72180843550leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.026e-344At1g75820843915CLV1 (CLAVATA 1)Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.C.G.S.X.
0.016e-344At1g08590837381CLAVATA1 receptor kinase (CLV1)similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.115e-32141Glycine maxGmaAffx.66617.1.S1_atBU760718--5e-33At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.035e-859Hordeum vulgareContig14472_atContig14472--4e-8At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.065e-861Oryza sativaOs01g0239700AK067723.1-Leucine-rich receptor-like protein kinase3e-8At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.161e-35153Populus trichocarpaPtpAffx.215531.1.S1_atpmrna29784hypothetical protein-1e-35At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.014e-138Triticum aestivumTa.12007.2.S1_atBG907089--2e-6At4g18250receptor serine/threonine kinase, putativeC.G.S.X.
0.083e-859Vitis vinifera1607952_atCF372631hypothetical protein LOC100250523-3e-8At1g28440HSL1 (HAESA-Like 1)C.G.S.X.
0.011e-552Zea maysZm.5225.1.A1_atAI615012hypothetical protein LOC100273591-4e-2At5g48740leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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