Gene omics information

Query gene ID At1g28190
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7989.1At1g28190839713unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBS.X.H.G.
0.3745.0At3g11840820357PUB24 (PLANT U-BOX 24)Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.S.X.H.G.
0.3439.8At1g76070843939unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFS.X.H.G.
0.3338.1At3g22160821780VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBVS.X.H.G.
0.3032.1At4g01010826427ATCNGC13member of Cyclic nucleotide gated channel familyS.X.H.G.
0.2830.3At4g22980828397-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBAS.X.H.G.
0.2726.2At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.2522.6At5g35735833550auxin-responsive family proteinF:unknown;P:unknown;C:plasma membrane, membrane;PMFOBS.X.H.G.
0.2522.6At2g39660818549BIK1 (BOTRYTIS-INDUCED KINASE1)Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.S.X.H.G.
0.2420.7At1g14370837999APK2A (PROTEIN KINASE 2A)Encodes protein kinase APK2a.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
117.799.9E-MEXP-1443-raw-cel-1581869921
102.699.9GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
71.299.9E-MEXP-807-raw-cel-1173272948
66.999.8GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
58.099.8GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responses
51.399.8E-MEXP-546-raw-cel-863289532
49.199.8GSM131161AtGen_C-11_2-Pi-6_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
48.399.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responses
46.499.8GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
40.499.8GSM204026protoplast_control_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.036e-342At5g20190832142bindingF:binding;P:biological_process unknown;C:chloroplast;PBOFMC.G.S.X.
0.016e-342At3g24080821994KRR1 family proteinF:molecular_function unknown;P:response to salt stress;C:cytosol;MOFBPVAC.G.S.X.
0.026e-342At1g30920839976F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-240At2g17680816275unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-240At1g05990837108calcium-binding protein, putativeF:calcium ion binding;P:unknown;C:cellular_component unknown;MFPOBC.G.S.X.
0.013e-240At1g79950844335helicase-relatedF:in 6 functions;P:regulation of transcription, DNA-dependent, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:mitochondrion;MBOFAPVC.G.S.X.
0.031e-138At5g57510835855unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.011e-138At5g52510835327scarecrow-like transcription factor 8 (SCL8)F:transcription factor activity;P:regulation of transcription;C:nucleus, cytoplasm;POFMBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Glycine maxHgAffx.20912.1.A1_atCK350619--6e-2At1g56420unknown proteinC.G.S.X.
0.048e-134Hordeum vulgareHF21N04r_atHF21N04r--2e+0At4g19150ankyrin repeat family proteinC.G.S.X.
0.035e-240Oryza sativaOs05g01646009633.m00646--9e-1At2g28440proline-rich family proteinC.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.205338.1.S1_atpmrna10569hypothetical protein-9e-1At1g71190SAG18 (SENESCENCE ASSOCIATED GENE 18)C.G.S.X.
0.044e-136Triticum aestivumTaAffx.51251.1.S1_atCA728679--2e+0At4g21500unknown proteinC.G.S.X.
0.041e-136Vitis vinifera1608002_s_atCF209324hypothetical protein LOC100259302-4e+0At3g13229unknown proteinC.G.S.X.
0.047e-134Zea maysZmAffx.1083.1.A1_atAI974922--1e+0At1g59830PP2A-1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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