Gene omics information

Query gene ID At1g27930
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g27930839686unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.4761.2At1g23490838957ATARF1 (ADP-RIBOSYLATION FACTOR 1)Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. A member of ARF GTPase family. Arabidopsis has 21 known members, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.S.X.H.G.
0.4659.8At3g13410820541unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;PS.X.H.G.
0.4659.8At3g58730825042vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)F:ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole;BMAOFPS.X.H.G.
0.4457.2At4g04210825736PUX4Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4)S.X.H.G.
0.4253.9At1g04690839450KAB1 (POTASSIUM CHANNEL BETA SUBUNIT)F:oxidoreductase activity, potassium channel activity;P:oxidation reduction, potassium ion transport;C:plasma membrane, membrane;BOFMPAS.X.H.G.
0.4253.9At1g70490843385ARFA1DA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.S.X.H.G.
0.3846.7At5g40810834081cytochrome c1, putativeF:electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity;P:unknown;C:mitochondrial respiratory chain, mitochondrion, vacuole, mitochondrial respiratory chain complex III, membrane;OBMFPS.X.H.G.
0.3745.0At3g12290820409tetrahydrofolate dehydrogenase/cyclohydrolase, putativeF:binding, catalytic activity;P:folic acid and derivative biosynthetic process, metabolic process;C:chloroplast;OBMFPAS.X.H.G.
0.3643.6At3g24160822002PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)Encodes a putative Type 1 membrane protein (PMP).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.399.4E-MEXP-1474-raw-cel-1593932801
10.499.2E-MEXP-1474-raw-cel-1593932897
9.799.1GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
9.699.1E-MEXP-1474-raw-cel-1593932737
8.699.0E-MEXP-1474-raw-cel-1593932545
8.299.0GSM133403Bramke_A3-warre-S6CGSE5711Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
7.998.9GSM133407Bramke_A1-warre-WTCGSE5711Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
7.998.9GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
7.898.9E-MEXP-1474-raw-cel-1593932769
7.898.9E-MEXP-1474-raw-cel-1593932705
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.215e-1065At1g67330843054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBC.G.S.X.
0.027e-342At3g05820819751beta-fructofuranosidase/ catalyticF:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPBC.G.S.X.
0.011e-138At4g33010829438AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)F:glycine dehydrogenase (decarboxylating) activity, pyridoxal phosphate binding, catalytic activity;P:glycine catabolic process, glycine decarboxylation via glycine cleavage system;C:mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope;OBFAMPC.G.S.X.
0.074e-136At1g71690843495unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBC.G.S.X.
0.022e+034At5g266223770734beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PC.G.S.X.
0.012e+034At5g55920835690nucleolar protein, putativeF:S-adenosylmethionine-dependent methyltransferase activity, RNA binding;P:rRNA processing;C:nucleolus;BMOFPVAC.G.S.X.
0.012e+034At5g59200836038pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:endomembrane system;POMFC.G.S.X.
0.022e+034At5g38500833838DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OMPFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.146e-756Glycine maxGmaAffx.50095.1.S1_atAW102297--4e-7At1g27930unknown proteinC.G.S.X.
0.023e+032Hordeum vulgareContig15488_atContig15488--2e-8At3g15090oxidoreductase, zinc-binding dehydrogenase family proteinC.G.S.X.
0.048e-136Oryza sativaOs02g01585009630.m00568-Uncharacterized plant-specific domain 01627containing protein6e-4At5g67210unknown proteinC.G.S.X.
0.072e-344Populus trichocarpaPtpAffx.19609.2.A1_atCV243642hypothetical protein-2e-3At1g27930unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.111985.1.S1_atCA635709--7e-2At1g27930unknown proteinC.G.S.X.
0.025e-134Vitis vinifera1609351_atCB975231--3e-1At5g14360ubiquitin family proteinC.G.S.X.
0.023e+032Zea maysZm.9631.1.A1_atBM336220Hypothetical protein LOC100216879-3e-1At5g52360ADF10 (ACTIN DEPOLYMERIZING FACTOR 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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