CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g27540

Gene name F-box family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g27540 839645 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
1.00 100.0 At4g19240 827664 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.50 65.3 At1g10110 837548 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.33 38.1 At4g27050 828813 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.10 3.4 At1g12350 837789 ATCOAB (4-phospho-panto-thenoylcysteine synthetase) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4’-phospho-N-pantothenoylcysteine (PPC) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.1 99.8 E-MEXP-728-raw-cel-1062074718
44.1 99.8 E-MEXP-728-raw-cel-1062074758
29.4 99.7 E-MEXP-728-raw-cel-1062074226
28.9 99.7 E-MEXP-728-raw-cel-1062074471
27.9 99.7 E-ATMX-24-raw-cel-1441078124
27.5 99.7 E-MEXP-728-raw-cel-1062074361
27.1 99.7 E-MEXP-728-raw-cel-1062074577
26.6 99.7 E-MEXP-728-raw-cel-1062074538
26.5 99.7 E-MEXP-728-raw-cel-1062074608
25.8 99.7 E-MEXP-728-raw-cel-1062074684
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.89 0 1752 At1g27580 839649 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.45 6e-32 139 At2g24080 816942 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.26 2e-19 97 At1g27550 839646 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.09 5e-14 79 At5g25300 832602 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM C.G. S.X.
0.07 7e-10 65 At2g14500 815937 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.15 1e-8 61 At5g25290 832601 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.06 6e-4 46 At4g10820 826678 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.14 6e-4 46 At2g14290 815916 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-1 36 Glycine max Gma.316.1.A1_at AW309258 - - 2e-1 At1g27580 F-box family protein C.G. S.X.
0.02 5e-3 42 Hordeum vulgare Contig3836_at Contig3836 - - 9e-3 At1g27540 F-box family protein C.G. S.X.
0.02 3e-1 38 Oryza sativa OsAffx.25260.1.S1_at - - - 0 C.G. S.X.
0.03 9e-1 36 Populus trichocarpa PtpAffx.10330.6.S1_at CV245094 - - 9e-1 At4g13095 LCR37 (Low-molecular-weight cysteine-rich 37) C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.2514.3.S1_x_at BG607698 - - 4e+0 At5g62290 nucleotide-sensitive chloride conductance regulator (ICln) family protein C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1606466_at CF512311 hypothetical protein LOC100250341 - 1e-80 At1g79830 GC5 (golgin candidate 5) C.G. S.X.
0.02 4e+0 32 Zea mays Zm.3973.1.A1_at AW288858 hypothetical protein LOC100192727 - 7e-17 At1g16040 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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