CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g26710

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g26710 839212 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P S.X. H.G.
0.96 97.3 At4g14815 827138 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P S.X. H.G.
0.96 97.3 At1g75920 843925 family II extracellular lipase 5 (EXL5) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM S.X. H.G.
0.94 96.7 At1g68875 843220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.93 96.4 At2g03850 814911 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA S.X. H.G.
0.93 96.4 At5g48210 834874 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.92 96.0 At1g13140 837871 CYP86C3 member of CYP86C S.X. H.G.
0.92 96.0 At1g74540 843795 CYP98A8 member of CYP98A S.X. H.G.
0.91 95.6 At1g20120 838601 family II extracellular lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV S.X. H.G.
0.91 95.6 At3g25050 822096 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
563.8 100.0 GSM62698 arf6/arf6 ARF8/arf8 flowers_stage 1-10 GSE2848 Auxin Response Factor mediated flower gene expression
265.5 100.0 GSM62694 Columbia flowers_stage 1-10 GSE2848 Auxin Response Factor mediated flower gene expression
146.9 99.9 GSM47019 Ler 9 GSE2473 Small RNA biogenesis mutants
133.8 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
85.0 99.9 GSM47018 Ler 8 GSE2473 Small RNA biogenesis mutants
83.5 99.9 E-MEXP-1592-raw-cel-1617526880
81.7 99.9 GSM131581 ATGE_32_C2 GSE5632 AtGenExpress: Developmental series (flowers and pollen)
81.5 99.9 E-MEXP-1592-raw-cel-1617526912
76.4 99.9 GSM62702 arf6 arf8 flowers_stage 1-10 GSE2848 Auxin Response Factor mediated flower gene expression
76.1 99.9 GSM47031 dcl3-121 GSE2473 Small RNA biogenesis mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.90 0 644 At1g26720 839213 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.02 2e-1 36 At2g41540 818752 GPDHC1 Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. C.G. S.X.
0.01 2e-1 36 At1g53440 841779 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.02 1e+0 34 At5g62260 836347 DNA binding F:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFVOB C.G. S.X.
0.02 1e+0 34 At5g22110 832272 ATDPB2 (ARABIDOPSIS THALIANA DNA POLYMERASE EPSILON SUBUNIT B2) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions. C.G. S.X.
0.01 1e+0 34 At1g48480 841269 RKL1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 9e-2 38 Glycine max GmaAffx.44630.1.A1_at BE657359 - - 4e-2 At1g26720 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBem05_SQ004_G20_at EBem05_SQ004_G20 - - 6e-1 At3g60600 VAP (VESICLE ASSOCIATED PROTEIN) C.G. S.X.
0.02 8e+0 32 Oryza sativa Os04g0423400 AK061494.1 - ABA/WDS induced protein family protein 1e-1 At1g55160 unknown protein C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.75353.1.A1_at CV273310 - - 2e+0 At5g09780 transcriptional factor B3 family protein C.G. S.X.
0.03 4e+0 32 Triticum aestivum Ta.4340.2.A1_a_at CA642143 - - 7e-8 At1g73660 protein kinase family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1610644_at CB345212 - - 3e+0 At1g26710 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.6118.1.A1_at CK986014 hypothetical protein LOC100276070 - 6e+0 At5g38895 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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