CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g26420

Gene name FAD-binding domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.36 43.6 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA S.X. H.G.
0.88 94.0 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. S.X. H.G.
0.77 88.0 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM S.X. H.G.
0.77 88.0 At4g23210 828420 protein kinase family protein Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. S.X. H.G.
0.73 85.5 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO S.X. H.G.
0.71 84.2 At4g12500 826862 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:unknown;POBMVFA S.X. H.G.
0.67 81.6 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.44 57.2 At1g51800 841606 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
191.6 100.0 GSM131139 AtGen_B-25_2-4-4_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
175.3 100.0 GSM131140 AtGen_B-26_2-5-4_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
163.3 99.9 GSM131111 AtGen_B-39_3-4-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
160.2 99.9 GSM131112 AtGen_B-40_3-5-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
104.1 99.9 E-MEXP-1094-raw-cel-1379507313
104.0 99.9 E-NASC-76-raw-cel-1359878976
103.0 99.9 E-NASC-76-raw-cel-1359879158
98.9 99.9 E-MEXP-1094-raw-cel-1379507273
72.3 99.9 GSM131126 AtGen_B-12_1-5-4_REP1_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
68.3 99.9 E-NASC-76-raw-cel-1359879106
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 1538 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
0.85 0 1521 At1g26410 839183 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cellular_component unknown;FBPOAM C.G. S.X.
0.87 0 1493 At1g26390 839181 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM C.G. S.X.
0.86 0 1429 At1g26400 839182 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM C.G. S.X.
0.63 4e-58 226 At4g20800 827828 FAD-binding domain-containing protein F:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM C.G. S.X.
0.02 5e-5 50 At4g20860 827834 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAM C.G. S.X.
0.02 1e-2 42 At1g30760 839958 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
0.02 5e-2 40 At5g44380 834464 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to oxidative stress;C:cell wall;BFOPAM C.G. S.X.
0.01 5e-2 40 At3g43300 823405 ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-5 52 Glycine max GmaAffx.86156.1.S1_at BI788352 - - 4e-6 At1g26420 FAD-binding domain-containing protein C.G. S.X.
0.02 4e-1 36 Hordeum vulgare Contig11541_at Contig11541 - - 3e-1 At2g05540 glycine-rich protein C.G. S.X.
0.04 6e-3 44 Oryza sativa Os06g0548200 AK105176.1 - FAD linked oxidase, N-terminal domain containingprotein 4e-3 At1g26420 FAD-binding domain-containing protein C.G. S.X.
0.10 5e-6 54 Populus trichocarpa PtpAffx.224210.1.S1_s_at pmrna42545 hypothetical protein - 3e-9 At1g26380 FAD-binding domain-containing protein C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.6692.3.S1_a_at CA699727 - - 2e-1 At1g65490 unknown protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1621997_s_at CF512249 hypothetical protein LOC100259237 - 2e-1 At1g14200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.10011.1.A1_at BM331860 glycine-rich protein GRP5 - 5e+0 At4g25950 VATG3 (vacuolar ATP synthase G3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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