CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g26390

Gene name FAD-binding domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.45 58.3 At1g26390 839181 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM S.X. H.G.
0.40 50.8 At2g30770 817628 CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13) putative cytochrome P450 S.X. H.G.
0.33 38.1 At3g18250 821353 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFO S.X. H.G.
0.32 35.7 At1g67980 843126 CCoAMT Encodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase. S.X. H.G.
0.30 32.1 At5g38900 833882 DSBA oxidoreductase family protein F:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMA S.X. H.G.
0.29 30.3 At3g13950 820608 unknown protein F:molecular_function unknown;P:unknown;C:unknown;P S.X. H.G.
0.26 24.4 At3g47540 823908 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF S.X. H.G.
0.25 22.6 At1g32940 840188 SBT3.5 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM S.X. H.G.
0.22 17.5 At3g26830 822298 PAD3 (PHYTOALEXIN DEFICIENT 3) Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. S.X. H.G.
0.20 14.4 At2g35980 818171 YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
291.9 100.0 E-MEXP-739-raw-cel-1099467321
136.3 99.9 GSM128719 Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1 GSE5525 Transcriptome changes of Arabidopsis during pathogen and insect attack
121.4 99.9 GSM128720 Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1 GSE5525 Transcriptome changes of Arabidopsis during pathogen and insect attack
113.6 99.9 E-MEXP-739-raw-cel-1099467339
99.4 99.9 GSM128661 Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
88.8 99.9 E-MEXP-739-raw-cel-1099467330
87.0 99.9 E-MEXP-711-raw-cel-1563002902
81.6 99.9 GSM133905 Yang_1-10_CPR5SCV1-2_Rep2_ATH1 GSE5745 Mutant array
76.0 99.9 GSM133025 BC181-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
62.3 99.8 E-MEXP-739-raw-cel-1099467267
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.87 0 1493 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA C.G. S.X.
0.86 0 1417 At1g26400 839182 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM C.G. S.X.
0.82 0 1055 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
0.84 0 932 At1g26410 839183 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cellular_component unknown;FBPOAM C.G. S.X.
0.59 1e-85 317 At4g20800 827828 FAD-binding domain-containing protein F:oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM C.G. S.X.
0.02 2e-7 57 At5g44360 834462 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
0.04 8e-4 46 At1g30760 839958 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
0.04 3e-3 44 At1g30720 839952 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA C.G. S.X.
0.02 3e-3 44 At1g30730 839953 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 5e-3 44 Glycine max GmaAffx.92274.1.S1_at CF807999 - - 1e-3 At1g30700 FAD-binding domain-containing protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HW09O19u_x_at HW09O19u - - 5e+0 At4g18180 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
0.02 4e-1 38 Oryza sativa Os01g0724200 NM_191829.1 - - 1e+0 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
0.10 5e-6 54 Populus trichocarpa PtpAffx.224790.1.S1_at pmrna43640 hypothetical protein - 3e-6 At1g26390 FAD-binding domain-containing protein C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.8733.1.S1_at CA620968 - - 2e-2 At1g12610 DDF1 (DWARF AND DELAYED FLOWERING 1) C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1621997_s_at CF512249 hypothetical protein LOC100259237 - 2e-1 At1g14200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 3e-1 36 Zea mays ZmAffx.967.1.S1_s_at AI668376 Hypothetical protein LOC100193584 - 1e+1 At5g29613 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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