Gene omics information

Query gene ID At1g26250
Gene name proline-rich extensin, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
0.8391.4At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.S.X.H.G.
0.8089.8At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.7788.0At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.7184.2At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.5368.6At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.4457.2At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
259.9100.0E-MEXP-828-raw-cel-1156922416
195.2100.0E-MEXP-828-raw-cel-1156922905
191.8100.0E-MEXP-828-raw-cel-1156922923
171.3100.0E-MEXP-828-raw-cel-1156922572
143.899.9E-MEXP-828-raw-cel-1156922386
137.199.9E-MEXP-828-raw-cel-1156922342
133.599.9E-MEXP-828-raw-cel-1156922944
120.099.9E-MEXP-828-raw-cel-1156922368
113.099.9GSM142724CH001_ATH1_A003-Hampt-c4a_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
108.699.9E-MEXP-828-raw-cel-1156922684
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.562e-149529At1g26240839165proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAC.G.S.X.
0.224e-36153At4g08370826393proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFOBVAC.G.S.X.
0.102e-1067At3g54580824623proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFBPOVAC.G.S.X.
0.083e-963At4g13390826970proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAC.G.S.X.
0.131e-861At1g23720838982proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVAC.G.S.X.
0.115e-859At5g06630830551proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAC.G.S.X.
0.165e-859At4g08380826395proline-rich extensin-like family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOBVAC.G.S.X.
0.125e-859At4g08410826400proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MFPOBVAC.G.S.X.
0.115e-859At3g54590824624ATHRGP1 (HYDROXYPROLINE-RICH GLYCOPROTEIN)Encodes a hydroxyproline-rich glycoprotein.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-656Glycine maxGmaAffx.50677.1.S1_x_atBI971744--2e-7At1g26250proline-rich extensin, putativeC.G.S.X.
0.023e-136Hordeum vulgareContig24413_atContig24413--1e+1At5g23411unknown proteinC.G.S.X.
0.021e-346Oryza sativaOs12g0541700AK103420.1-RALF2e+0At2g07521unknown proteinC.G.S.X.
0.204e-654Populus trichocarpaPtpAffx.200833.1.S1_x_atpmrna1624hypothetical protein-1e-3At1g26250proline-rich extensin, putativeC.G.S.X.
0.022e-138Triticum aestivumTa.6892.2.S1_atBG908930--8e-1At2g28570unknown proteinC.G.S.X.
0.178e-444Vitis vinifera1615789_atBQ795769--1e-3At1g26250proline-rich extensin, putativeC.G.S.X.
0.037e-238Zea maysZm.16790.1.S1_atAY110991.1--1e-2At2g43150proline-rich extensin-like family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0009664A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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