Gene omics information

Query gene ID At1g25510
Gene name aspartyl protease family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4355.3At1g25510839137aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOS.X.H.G.
0.4862.5At1g51460841571ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPVS.X.H.G.
0.4253.9At3g08770820024LTP6Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.S.X.H.G.
0.3541.6At5g20740832197invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.3541.6At5g23940832459EMB3009 (embryo defective 3009)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBOS.X.H.G.
0.3133.8At5g39220833918hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMPAFS.X.H.G.
0.3032.1At3g04960819656-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.2726.2At3g18850821418LPAT5F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPVS.X.H.G.
0.2624.4At2g42200818820SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.S.X.H.G.
0.2319.3At5g07280830619EMS1 (EXCESS MICROSPOROCYTES1)Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ems1 mutants lack the tapetum. Acts as regulator of anther cell differentiationS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
116.399.9GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
115.599.9GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
111.899.9GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
84.399.9GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
55.799.8GSM131631ATGE_58_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
51.699.8GSM131630ATGE_58_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
49.099.8GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
48.699.8GSM131632ATGE_58_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
43.099.8GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.095e-550At3g18490821379aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBC.G.S.X.
0.031e-242At1g01300839375aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:membrane, plant-type cell wall;PMFOC.G.S.X.
0.032e-138At2g16015816098unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.012e-138At1g72790843610hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MPFOBVAC.G.S.X.
0.017e-136At4g21910828280MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMC.G.S.X.
0.017e-136At4g00300828072fringe-related proteinF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;PFMOBC.G.S.X.
0.017e-136At3g24503822042ALDH2C4Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectivelyC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-346Glycine maxGma.1274.1.S1_atAI794662--3e-7At3g18490aspartyl protease family proteinC.G.S.X.
0.034e-446Hordeum vulgareContig11988_atContig11988--1e-1At3g18490aspartyl protease family proteinC.G.S.X.
0.069e-240Oryza sativaOs01g0140100AK068990.1-Peptidase A1, pepsin family protein6e-5At3g18490aspartyl protease family proteinC.G.S.X.
0.092e-1481Populus trichocarpaPtpAffx.208004.1.S1_atpmrna15886--1e-14At1g25510aspartyl protease family proteinC.G.S.X.
0.035e-240Triticum aestivumTa.16304.1.S1_atCA604423--6e-2At3g18490aspartyl protease family proteinC.G.S.X.
0.028e-134Vitis vinifera1607752_atCF513611hypothetical protein LOC100259452-7e-12At3g18490aspartyl protease family proteinC.G.S.X.
0.021e+034Zea maysZm.12763.1.S1_atCA398371--1e+0At5g47760ATPGLP2 (ARABIDOPSIS THALIANA 2-PHOSPHOGLYCOLATE PHOSPHATASE 2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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