Gene omics information

Query gene ID At1g24600
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7687.4At1g24600839074unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8994.6At1g74540843795CYP98A8member of CYP98AS.X.H.G.
0.8894.0At4g14815827138protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PS.X.H.G.
0.8894.0At2g03740814901late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFAS.X.H.G.
0.8793.5At1g30020839881unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8793.5At4g37900829946glycine-rich proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVAS.X.H.G.
0.8793.5At1g13140837871CYP86C3member of CYP86CS.X.H.G.
0.8592.4At5g48210834874unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8491.9At5g16960831559NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPAS.X.H.G.
0.8491.9At1g67990843127TSM1Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
168.6100.0GSM253195RGA-GR-MOCK-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible system
112.099.9GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
106.899.9GSM253197RGA-GR-MOCK-REP3GSE10019Identification of RGA downstream genes by using steroid-inducible system
80.799.9GSM253194RGA-GR-DEX-REP1GSE10019Identification of RGA downstream genes by using steroid-inducible system
79.299.9GSM253196RGA-GR-DEX-REP2GSE10019Identification of RGA downstream genes by using steroid-inducible system
75.599.9GSM218293At_NaCl_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
67.399.8GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
65.899.8GSM62694Columbia flowers_stage 1-10GSE2848Auxin Response Factor mediated flower gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.171e-136At1g67920843120unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.014e-134Atcg01010--Chloroplast encoded NADH dehydrogenase unit.C.G.S.X.
0.034e-134At4g22900828389unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFC.G.S.X.
0.022e+032At5g25900832659GA3 (GA REQUIRING 3)Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.C.G.S.X.
0.042e+032At3g22320821801NRPB5Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.C.G.S.X.
0.032e+032At3g50670824230U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)Encodes U1 snRNP 70KC.G.S.X.
0.072e+032At2g31085817664CLE6 (CLAVATA3/ESR-RELATED 6)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo.C.G.S.X.
0.022e+032At2g36690818241oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biosynthetic process;C:cellular_component unknown;POBFMC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e+032Glycine maxGmaAffx.85033.1.S1_atAW733614--5e-4At5g38700unknown proteinC.G.S.X.
0.042e-134Hordeum vulgareContig8515_s_atContig8515--8e-2At4g09010APX4 (ASCORBATE PEROXIDASE 4)C.G.S.X.
0.043e+032Oryza sativaOs09g05496009637.m03206-Heavy metal transport/detoxification proteindomain containing protein8e-2At5g41050unknown proteinC.G.S.X.
0.079e+030Populus trichocarpaPtpAffx.53904.1.S1_atDN500780--6e-1At4g25700BETA-OHASE 1 (BETA-HYDROXYLASE 1)C.G.S.X.
0.072e+032Triticum aestivumTaAffx.56445.1.S1_x_atCA651526--4e-1At3g20600NDR1 (non race-specific disease resistance 1)C.G.S.X.
0.055e-132Vitis vinifera1608951_atCF515796--9e-1At5g46090unknown proteinC.G.S.X.
0.057e-132Zea maysZm.19234.1.A1_atAI622555hypothetical protein LOC100191668-3e-1At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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