Gene omics information

Query gene ID At1g24000
Gene name Bet v I allergen family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6579.6At1g24000839012Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.9296.0At1g20680838656unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POBMS.X.H.G.
0.9296.0At1g31290840017PAZ domain-containing protein / piwi domain-containing proteinF:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAS.X.H.G.
0.9095.1At1g51000841522unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9095.1At3g11870820360protein kinase-relatedF:endoribonuclease activity, producing 5'-phosphomonoesters, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, mRNA processing;C:endomembrane system;MOPFBVAS.X.H.G.
0.9095.1At3g21860821740ASK10 (ARABIDOPSIS SKP1-LIKE 10)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:SCF ubiquitin ligase complex;MPOFVS.X.H.G.
0.8894.0At4g29650829086cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolaseF:cytidine deaminase activity, catalytic activity, zinc ion binding;P:pyrimidine salvage;C:cellular_component unknown;BPOS.X.H.G.
0.8793.5At4g22050828294aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;MFOPS.X.H.G.
0.8592.4At4g29570829078cytidine deaminase, putative / cytidine aminohydrolase, putativeF:hydrolase activity, cytidine deaminase activity, catalytic activity, zinc ion binding;P:cytidine deamination, cytidine metabolic process;C:cellular_component unknown;BPOS.X.H.G.
0.8491.9At1g73000843631-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1561.4100.0GSM311282Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
1297.5100.0GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
883.7100.0GSM311279Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
668.3100.0GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
203.8100.0GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
192.5100.0GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
129.799.9GSM311286Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
63.799.8GSM311285Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
24.799.6GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.799.4GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.673e-68258At1g23910839002-F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PC.G.S.X.
0.062e-136At4g15715827249-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.027e-134At4g21900828279antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;MPOC.G.S.X.
0.027e-134At3g18750821406WNK6 (WITH NO K (=LYSINE) 6)Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.C.G.S.X.
0.037e-134At3g25540822140LAG1LAG1 homolog 1C.G.S.X.
0.027e-134At1g77480844084nucellin protein, putativeF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;POFMC.G.S.X.
0.017e-134At1g31730840060epsilon-adaptin, putativeF:protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;OMFPBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxGmaAffx.43840.1.S1_atBE023619--8e-1At4g29285LCR24 (Low-molecular-weight cysteine-rich 24)C.G.S.X.
0.043e-134Hordeum vulgareContig25667_x_atContig25667--7e-1At1g24000Bet v I allergen family proteinC.G.S.X.
0.055e+032Oryza sativaOsAffx.12905.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.204436.1.S1_atpmrna8713hypothetical protein-7e-1At1g24000Bet v I allergen family proteinC.G.S.X.
0.047e-134Triticum aestivumTaAffx.53897.1.S1_atCA687979--7e-1At1g23910-C.G.S.X.
0.043e+030Vitis vinifera1610261_atBQ792431hypothetical protein LOC100261508-6e-2At1g60650glycine-rich RNA-binding protein, putativeC.G.S.X.
0.052e+128Zea maysZmAffx.744.1.A1_s_atAI745738global transcription factor group E-1e-1At1g48300unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0009607A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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