Gene omics information

Query gene ID At1g23910
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g23910839002-F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.9897.8At4g02910828141unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9697.3At5g17950831662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9496.7At4g16930827401disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.9496.7At1g23610838971unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9396.4At2g25990817140unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.9296.0At1g33000840195transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.9296.0At1g65170842824ubiquitin carboxyl-terminal hydrolase family proteinF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PMOS.X.H.G.
0.9296.0At2g37610818338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At5g12450831120-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
526.1100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.671e-68258At1g24000839012Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PC.G.S.X.
0.034e-134At3g44320823557NIT3 (NITRILASE 3)This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.C.G.S.X.
0.024e-134At1g19650838552SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:phosphatidylinositol transporter activity, transporter activity;P:transport;C:plasma membrane;MPFOC.G.S.X.
0.012e+032At5g55770835671DC1 domain-containing proteinF:protein binding, zinc ion binding;P:unknown;C:cellular_component unknown;PMOC.G.S.X.
0.042e+032At1g02880839303TPK1 (THIAMIN PYROPHOSPHOKINASE1)Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e+032Glycine maxGmaAffx.43840.1.S1_atBE023619--8e-1At4g29285LCR24 (Low-molecular-weight cysteine-rich 24)C.G.S.X.
0.053e+030Hordeum vulgareContig7909_atContig7909--3e+0At4g33750-C.G.S.X.
0.048e-134Oryza sativaOs07g0241900NM_186800.1--1e+0At1g23910-C.G.S.X.
0.062e+032Populus trichocarpaPtpAffx.204436.1.S1_atpmrna8713hypothetical protein-7e-1At1g24000Bet v I allergen family proteinC.G.S.X.
0.064e-134Triticum aestivumTaAffx.53897.1.S1_atCA687979--7e-1At1g23910-C.G.S.X.
0.058e+028Vitis vinifera1622299_s_atCK136935.1hypothetical protein LOC100255647-7e-10At5g54190PORAC.G.S.X.
0.043e+030Zea maysZm.9251.2.A1_a_atBM268759hypothetical protein LOC100194001-4e+0At3g25250AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0009607A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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