CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g23590

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g23590 838969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.94 96.7 At1g23520 838960 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.91 95.6 At3g52810 824447 PAP21 (PURPLE ACID PHOSPHATASE 21) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFA S.X. H.G.
0.90 95.1 At5g61605 836282 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.88 94.0 At1g30350 839915 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO S.X. H.G.
0.88 94.0 At5g07540 830647 GRP16 (GLYCINE-RICH PROTEIN 16) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). S.X. H.G.
0.86 93.1 At1g23250 838934 calcium ion binding F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO S.X. H.G.
0.86 93.1 At1g23240 838933 caleosin-related family protein F:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFO S.X. H.G.
0.86 93.1 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). S.X. H.G.
0.84 91.9 At1g23670 838977 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
252.9 100.0 GSM106833 opr3_JA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
158.0 99.9 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
156.3 99.9 GSM106827 opr3_0 hr_Rep2 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
145.3 99.9 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
145.1 99.9 GSM106919 opr3_OPDA_0.5 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
131.5 99.9 GSM106934 opr3_OPDA_8 hrs_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
130.0 99.9 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
124.0 99.9 GSM131593 ATGE_36_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
117.9 99.9 GSM106825 opr3_0 hr_Rep1 GSE4733 Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
112.1 99.9 GSM62698 arf6/arf6 ARF8/arf8 flowers_stage 1-10 GSE2848 Auxin Response Factor mediated flower gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.31 9e-45 180 At1g23570 838967 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.44 1e-40 167 At1g23580 838968 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.36 5e-40 165 At1g23690 838979 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.38 2e-33 143 At1g23600 838970 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.43 3e-26 119 At1g23630 - - - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Glycine max Gma.12641.1.A1_at CD393495 - - 3e+0 At2g33775 RALFL19 (ralf-like 19) C.G. S.X.
0.03 3e-3 42 Hordeum vulgare EBro08_SQ010_P03_at EBro08_SQ010_P03 - - 5e-3 At1g23610 unknown protein C.G. S.X.
0.04 3e+0 34 Oryza sativa OsAffx.8347.1.S1_at - - - 0 C.G. S.X.
0.03 1e-1 38 Populus trichocarpa PtpAffx.141523.1.A1_at AJ774531 - - 7e+0 At5g59510 RTFL5 (ROTUNDIFOLIA LIKE 5) C.G. S.X.
0.03 1e+0 34 Triticum aestivum Ta.11082.1.S1_x_at BQ168509 Bowman-Birk trypsin inhibitor-like protein - 1e+0 At1g23590 unknown protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1618978_at CF519087 zinc finger RING-type protein-like - 1e+0 At1g23590 unknown protein C.G. S.X.
0.03 5e-1 34 Zea mays ZmAffx.706.1.A1_at AI738209 - - 8e-1 At1g23590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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