Gene omics information

Query gene ID At1g23030
Gene name armadillo/beta-catenin repeat family protein / U-box domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2522.6At1g23030838911armadillo/beta-catenin repeat family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVS.X.H.G.
0.6781.6At1g03870839384FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)fasciclin-like arabinogalactan-protein 9 (Fla9)S.X.H.G.
0.5065.3At5g44020834425acid phosphatase class B family proteinF:acid phosphatase activity;P:biological_process unknown;C:chloroplast, vacuole, membrane;PBOS.X.H.G.
0.4659.8At4g12730826885FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cdsS.X.H.G.
0.061.4At5g54380835526THE1 (THESEUS1)F:protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.199.8GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
31.199.7GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
28.799.7GSM131183AtGen_D-15_1-US_REP1_ATH1GSE5617AtGenExpress: Light treatments
28.799.7GSM133257RIKEN-GODA13A-6GSE5696AtGenExpress: Effect of brassinosteroids in seedlings
28.099.7GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatments
27.899.7GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatments
27.599.7GSM131206AtGen_D-40_3-WL_REP3_ATH1GSE5617AtGenExpress: Light treatments
26.799.7GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatments
26.599.7GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatments
25.899.7GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.569e-75282At1g71020843442armadillo/beta-catenin repeat family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVC.G.S.X.
0.076e-859At2g28830817432binding / structural constituent of ribosome / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, structural constituent of ribosome, binding;P:response to chitin;C:ubiquitin ligase complex, ribosome, intracellular;PMFOBVC.G.S.X.
0.016e-550At1g29340839808PUB17 (PLANT U-BOX 17)Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.C.G.S.X.
0.022e-448At3g54850824650PUB14Encodes a protein with ubiquitin ligase activity.C.G.S.X.
0.021e-346At3g46510823804PUB13 (PLANT U-BOX 13)Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.C.G.S.X.
0.021e-242At5g67340836869armadillo/beta-catenin repeat family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;PMOFBC.G.S.X.
0.026e-240At1g15165838082U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;POBMC.G.S.X.
0.012e-138At5g16410831502transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-34149Glycine maxGma.17983.1.S1_s_atAW101113--8e-35At1g23030armadillo/beta-catenin repeat family protein / U-box domain-containing proteinC.G.S.X.
0.053e-240Hordeum vulgareContig10562_atContig10562--1e-3At2g28830binding / structural constituent of ribosome / ubiquitin-protein ligaseC.G.S.X.
0.082e-965Oryza sativaOs02g0732200AK102091.1-U box domain containing protein1e-9At1g23030armadillo/beta-catenin repeat family protein / U-box domain-containing proteinC.G.S.X.
0.166e-963Populus trichocarpaPtpAffx.29594.2.S1_atCF234400--2e-9At1g23030armadillo/beta-catenin repeat family protein / U-box domain-containing proteinC.G.S.X.
0.081e-656Triticum aestivumTaAffx.12686.1.S1_atCA648409--3e-7At1g23030armadillo/beta-catenin repeat family protein / U-box domain-containing proteinC.G.S.X.
0.021e+034Vitis vinifera1622388_atCF568932--4e-3At1g34780ATAPRL4 (APR-like 4)C.G.S.X.
0.022e+034Zea maysZm.17945.1.A1_atCK827164--2e+1At5g20020RAN2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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