Gene omics information

Query gene ID At1g23020
Gene name FRO3
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At1g23020838910FRO3Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon.S.X.H.G.
0.8693.1At3g56980824865BHLH039F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFS.X.H.G.
0.6781.6At5g04150830293BHLH101F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOVBFS.X.H.G.
0.3846.7At5g05250830407unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.092.8At1g74760---S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
174.6100.0GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
113.999.9GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
106.499.9GSM265471Arabidopsis, whole roots, -Fe, 48 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
92.999.9GSM265472Arabidopsis, whole roots, -Fe, 48 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
90.499.9GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
90.299.9GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
77.199.9GSM125257Seedling_OETOP6B_rep2GSE5465Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes
72.699.9GSM125256Seedling_OETOP6B_rep1GSE5465Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes
70.199.9GSM265469Arabidopsis, whole roots, -Fe, 24 hour, rep 1GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
66.399.8GSM265470Arabidopsis, whole roots, -Fe, 24 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8201088At1g01590837194FRO1 (FERRIC REDUCTION OXIDASE 1)Encodes a ferric-chelate reductase that is expressed at extremely low levels in Fe deficiency-induced seedlings.C.G.S.X.
0.342e-66254At1g01580839411FRO2 (FERRIC REDUCTION OXIDASE 2)Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.C.G.S.X.
0.067e-1169At5g23980832463FRO4 (FERRIC REDUCTION OXIDASE 4)Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and cotyledons, but not flowers. Its transcription is regulated by FIT1.C.G.S.X.
0.071e-965At5g23990832464FRO5 (FERRIC REDUCTION OXIDASE 5)Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.C.G.S.X.
0.022e-242At1g09575837484unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPFOC.G.S.X.
0.013e-138At5g18120831930ATAPRL7 (APR-like 7)Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.C.G.S.X.
0.011e+036At1g120643766707unknown proteinF:unknown;P:unknown;C:endomembrane system;PC.G.S.X.
0.011e+036At1g02580839422MEA (MEDEA)Encodes a putative transcription factor MEDEA (MEA) that negatively regulates seed development in the absence of fertilization. Mutations in this locus result in embryo lethality. MEA is a Polycomb group gene that is imprinted in the endosperm. The maternal allele is expressed and the paternal allele is silent. MEA is controlled by DEMETER (DME), a DNA glycosylase required to activate MEA expression, and METHYLTRANSFERASE I (MET1), which maintains CG methylation at the MEA locus. MEA is involved in the negative regulation of its own imprinted gene expression; the effect is not only allele-specific but also dynamically regulated during seed development. In the ovule, the MEA transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilizationC.G.S.X.
0.014e+034At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Glycine maxGmaAffx.54104.1.S1_atBF069245--2e-1At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
0.012e+034Hordeum vulgareContig12780_atContig12780--5e-1At2g16575unknown proteinC.G.S.X.
0.012e+036Oryza sativaOs02g0744600AK058756.1-Hypothetical protein9e-4At4g13410ATCSLA15C.G.S.X.
0.064e-757Populus trichocarpaPtpAffx.221575.1.S1_atpmrna38527hypothetical protein-2e-11At5g23990FRO5 (FERRIC REDUCTION OXIDASE 5)C.G.S.X.
0.024e+034Triticum aestivumTaAffx.79641.1.S1_atCA711515--2e-1At1g24270unknown proteinC.G.S.X.
0.011e+034Vitis vinifera1616580_atCF206767.1hypothetical protein LOC100260322-2e+0At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)C.G.S.X.
0.011e-138Zea maysZm.1125.2.S1_atCF036557--4e+0At5g51860MADS-box protein (AGL72)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage