Gene omics information

Query gene ID At1g23010
Gene name LPR1 (Low Phosphate Root1)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At1g23010838909LPR1 (Low Phosphate Root1)Encodes a protein with multicopper oxidase activity.S.X.H.G.
0.7486.1At3g01530821113AtMYB57 (myb domain protein 57)Member of the R2R3 factor gene family.S.X.H.G.
0.7385.5At5g10770830944chloroplast nucleoid DNA-binding protein, putativeF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBS.X.H.G.
0.6781.6At2g45580819166CYP76C3member of CYP76CS.X.H.G.
0.6176.7At4g39480830103CYP96A9 (CYTOCHROME P450 96 A9)member of CYP96AS.X.H.G.
0.5974.7At1g09155837435AtPP2-B15 (Phloem protein 2-B15)F:carbohydrate binding;P:unknown;C:endomembrane system;PS.X.H.G.
0.5974.7At1g61680842465TPS14 (TERPENE SYNTHASE 14)F:S-linalool synthase activity;P:monoterpene biosynthetic process;C:plastid;POS.X.H.G.
0.5974.7At2g24210816955TPS10 (terpene synthase 10)F:myrcene synthase activity, (E)-beta-ocimene synthase activity;P:response to jasmonic acid stimulus, monoterpenoid biosynthetic process, response to wounding;C:unknown;POS.X.H.G.
0.5873.8At1g66120842926acyl-activating enzyme 11 (AAE11)F:catalytic activity;P:metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.5570.6At1g22380838845AtUGT85A3 (UDP-glucosyl transferase 85A3)F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
231.7100.0GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
182.6100.0GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
174.5100.0GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
140.899.9GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
132.999.9GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
117.899.9GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.505e-67256At1g71040843444LPR2 (Low Phosphate Root2)F:oxidoreductase activity, copper ion binding;P:cellular response to phosphate starvation;C:cell wall, membrane;BPOFMAC.G.S.X.
0.012e-138At2g42230818823tubulin-specific chaperone C-relatedF:binding;P:biological_process unknown;C:cellular_component unknown;MOPC.G.S.X.
0.019e-136At5g08720830772-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OBPAMC.G.S.X.
0.029e-136At5g10390830903histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOC.G.S.X.
0.019e-136At3g49980824160F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOC.G.S.X.
0.019e-136At2g33435817908RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
0.019e-136At2g18620816377geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeF:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFAMVC.G.S.X.
0.029e-136At1g28250839719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.095e-344Glycine maxGmaAffx.22261.1.S1_atBU550793--2e-3At1g23010LPR1 (Low Phosphate Root1)C.G.S.X.
0.047e-342Hordeum vulgareHVSMEf0015P21r2_s_atHVSMEf0015P21r2--5e-3At1g23010LPR1 (Low Phosphate Root1)C.G.S.X.
0.047e+034Oryza sativaOs01g0126200AK121464.1-Spore coat protein-like protein7e-2At1g71040LPR2 (Low Phosphate Root2)C.G.S.X.
0.138e-550Populus trichocarpaPtpAffx.208892.1.S1_atpmrna17641hypothetical protein-6e-5At1g71040LPR2 (Low Phosphate Root2)C.G.S.X.
0.024e+034Triticum aestivumTa.13860.2.A1_atCA658035--9e-1At4g15450-C.G.S.X.
0.014e+032Vitis vinifera1622037_s_atCF205545.1hypothetical protein LOC100260578-3e-16At2g33270ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)C.G.S.X.
0.022e+034Zea maysZm.7819.1.A1_atBM080027--5e+0At5g20935unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010073Any process involved in maintaining the identity, size and shape of a meristem.
XGO:0016036A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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