Gene omics information

Query gene ID At1g22280
Gene name protein phosphatase 2C, putative / PP2C, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At1g22280838835protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, plasma membrane;PMOBFVAS.X.H.G.
0.6781.6At2g37940818371-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPS.X.H.G.
0.6781.6At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.6781.6At5g37070833678unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.6781.6At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationS.X.H.G.
0.6075.7At5g02290831880NAKEncodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.399.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
38.699.8GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
32.499.7GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
31.399.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
28.299.7GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
27.899.7E-MEXP-1443-raw-cel-1581869921
26.099.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
25.999.7GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
25.599.7GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
23.799.6GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.443e-36153At1g78200844156protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:plasma membrane;PMOBFVAC.G.S.X.
0.437e-961At1g34750840379protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:plasma membrane;PMOBFVAC.G.S.X.
0.033e-550At3g15260820757protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:unknown;MPOFBVAC.G.S.X.
0.033e-240At3g21980821757receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.033e-240At3g21990821759receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.023e-240At3g22010821761receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.153e-1273Glycine maxGma.6252.1.S1_atBQ612459--1e-12At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.119e-1063Hordeum vulgareContig3172_atContig3172--3e-9At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.132e-1067Oryza sativaOs04g0452000BM422041-Protein phosphatase type 2C2e-10At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.283e-24113Populus trichocarpaPtpAffx.116899.1.S1_atCV265143hypothetical protein-2e-24At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.083e-859Triticum aestivumTa.28879.1.S1_a_atBJ306387--5e-8At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.443e-30131Vitis vinifera1612226_atCB974061hypothetical protein LOC100259151-1e-29At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.108e-754Zea maysZm.2975.1.S1_atCO517487Protein phosphatase type 2c-like-7e-7At1g34750protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006470The process of removing one or more phosphoric residues from a protein.
XGO:0010161The series of molecular signals initiated upon sensing of red light by a photoreceptor molecule. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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