Gene omics information

Query gene ID At1g22090
Gene name emb2204 (embryo defective 2204)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PS.X.H.G.
0.8089.8At2g20800816609NDB4 (NAD(P)H dehydrogenase B4)F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAMS.X.H.G.
0.6781.6At1g3624084053060S ribosomal protein L30 (RPL30A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit;MOAFPBS.X.H.G.
0.6781.6At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFS.X.H.G.
0.5570.6At2g47260819339WRKY23member of WRKY Transcription Factor; Group IS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.108e-652At1g23950839006unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.083e-550At1g02770839421unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.062e-344At5g41640834166unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.118e-342At3g19520821488unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Glycine maxGmaAffx.44540.1.S1_s_atBE583864--6e-1At5g18661unknown proteinC.G.S.X.
0.024e+032Hordeum vulgareContig25002_atContig25002--1e+0At3g07425unknown proteinC.G.S.X.
0.031e+036Oryza sativaOsAffx.9048.1.S1_at---0C.G.S.X.
0.047e-136Populus trichocarpaPtpAffx.117473.1.S1_atDN496167hypothetical protein-1e-1At3g46230ATHSP17.4C.G.S.X.
0.032e+034Triticum aestivumTaAffx.35389.1.S1_atBQ608505--4e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
0.021e-136Vitis vinifera1612722_atCF372454hypothetical protein LOC100264158-2e+0At4g1810060S ribosomal protein L32 (RPL32A)C.G.S.X.
0.028e-134Zea maysZm.9151.1.S1_atBM266916katanin p60 ATPase-containing subunit-3e-1At1g80350ERH3 (ECTOPIC ROOT HAIR 3)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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