Gene omics information

Query gene ID At1g21530
Gene name AMP-binding protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g21530838754AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.5974.7At1g65740842885F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At2g14830815971unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVS.X.H.G.
0.5773.8At1g55790842028ATP binding / nucleotide binding / phenylalanine-tRNA ligaseF:phenylalanine-tRNA ligase activity, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:cytoplasm;PFMOBS.X.H.G.
0.5673.0At1g23510838959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5570.6At4g39756830133kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAVS.X.H.G.
0.5469.5At3g274503768952-F:unknown;P:unknown;C:unknownS.X.H.G.
0.5368.6At4g03380827946-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5267.4At4g23090828408unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
0.5267.4At5g51900835265cytochrome P450 familyF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;PFBMOAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
834.4100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
661.5100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
495.7100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
410.6100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
296.4100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
236.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
219.3100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
215.0100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
117.699.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
116.199.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.850868At1g21540838755AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.575e-36153At1g77240844060AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.099e-1065At5g16340831495AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.141e-861At1g75960843929AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.103e-654At5g16370831498AAE5 (ACYL ACTIVATING ENZYME 5)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAVC.G.S.X.
0.031e-552At2g17650816272AMP-dependent synthetase and ligase family proteinF:catalytic activity;P:metabolic process;C:mitochondrion;BOMFPAVC.G.S.X.
0.019e-446At1g65880842900BZO1 (BENZOYLOXYGLUCOSINOLATE 1)Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.C.G.S.X.
0.021e-242At3g16910820946AAE7 (ACYL-ACTIVATING ENZYME 7)Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-656Glycine maxGma.4483.1.S1_atCF921631--1e-9At1g75960AMP-binding protein, putativeC.G.S.X.
0.031e-138Hordeum vulgareContig5528_atContig5528--2e-1At1g21530AMP-binding protein, putativeC.G.S.X.
0.022e+036Oryza sativaOsAffx.17511.1.S1_at---0C.G.S.X.
0.232e-1481Populus trichocarpaPtpAffx.225188.1.S1_atpmrna44342acyl:coa ligase acetate-coa synthetase-like protein-2e-14At1g21530AMP-binding protein, putativeC.G.S.X.
0.022e-138Triticum aestivumTaAffx.58394.1.S1_atCA619993--2e-4At5g22070unknown proteinC.G.S.X.
0.022e-240Vitis vinifera1613548_atCB009193similar to adenosine monophosphate binding protein 1 AMPBP1-2e-2At1g21530AMP-binding protein, putativeC.G.S.X.
0.011e+034Zea maysZm.4684.1.A1_atBQ619021--1e-23At5g53460GLT1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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