Gene omics information

Query gene ID At1g21480
Gene name exostosin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g21480838746exostosin family proteinF:catalytic activity;P:biological_process unknown;C:Golgi apparatus, membrane;PMOBFS.X.H.G.
0.4659.8At1g30300839910unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPAFS.X.H.G.
0.3745.0At1g25375839123metallo-beta-lactamase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFAPS.X.H.G.
0.3235.7At2g27460817291sec23/sec24 transport family proteinF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPBS.X.H.G.
0.3235.7At1g55130841956endomembrane protein 70, putativeF:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFBS.X.H.G.
0.3032.1At4g39240830080kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAVFS.X.H.G.
0.3032.1At3g26370822241unknown proteinF:unknown;P:unknown;C:Golgi apparatus;PS.X.H.G.
0.2930.3At1g21710838775OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1)Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.S.X.H.G.
0.2930.3At1g05055839332GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2)Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.S.X.H.G.
0.2830.3At2g36240818196-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.199.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
37.699.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
36.799.7GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
32.799.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
32.399.7GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.399.7GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
27.999.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
27.699.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.799.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
26.499.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-240At4g35520829704MLH3 (MUTL PROTEIN HOMOLOG 3)DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossoversC.G.S.X.
0.014e-240At2g25560817094DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAVC.G.S.X.
0.022e-138At5g50830835155unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.012e-138At1g29470839823dehydration-responsive protein-relatedF:unknown;P:biological_process unknown;C:Golgi apparatus;OMBFPVAC.G.S.X.
0.017e-136At2g41560818754ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4)encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. localized to the vacuole.C.G.S.X.
0.023e+034At3g42990823355unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-344Glycine maxGmaAffx.1663.1.S1_atBQ296156--1e-3At1g21480exostosin family proteinC.G.S.X.
0.021e+034Hordeum vulgarerbaal9a16_atrbaal9a16--1e+0At4g08170inositol 1,3,4-trisphosphate 5/6-kinase family proteinC.G.S.X.
0.181e-22109Oryza sativaOs.52064.1.S1_at---0C.G.S.X.
0.175e-24113Populus trichocarpaPtpAffx.114727.1.A1_atCV231670hypothetical protein-1e-16At1g21480exostosin family proteinC.G.S.X.
0.252e-29131Triticum aestivumTa.7348.2.S1_atBJ313111--7e-30At1g21480exostosin family proteinC.G.S.X.
0.023e+032Vitis vinifera1619276_atCF606876hypothetical protein LOC100259521-1e-7At3g61580delta-8 sphingolipid desaturase (SLD1)C.G.S.X.
0.205e-1271Zea maysZm.18347.1.A1_atBM078855hypothetical protein LOC100192822-1e-11At1g21480exostosin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase
00437Link to KaPPA-View 4Xyloglucan biosynthesis and modification
00439Link to KaPPA-View 4Rhamnogalacturonan I biosynthesis
00441Link to KaPPA-View 4Rhamnogalacturonan II biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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